Jatropha Genome Database
- JcCA0155001.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0155001.20 + phase: 0
(3342 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03282 252 5e-66
KJC_c01558 101 1e-20
KJC_c06357 86 6e-16
>KJC_c03282
Length = 1255
Score = 252 bits (127), Expect = 5e-66
Identities = 525/655 (80%), Gaps = 2/655 (0%)
Strand = Plus / Minus
Query: 2521 tctggtacttttggaactgtttattatgggaagtggaggggtactgatgttgctattaag 2580
|||||||||||||||||||| ||| | || || |||||||| | |||||||||||||||
Sbjct: 1074 tctggtacttttggaactgtgtatcacggcaaatggaggggatcagatgttgctattaag 1015
Query: 2581 aggatcaaaaagagttgtttttcaggaagatcatcagagcaagagcggctgatcaaagac 2640
||| | || |||| |||||| | || ||||||||||||||||| | |||| || |||
Sbjct: 1014 aggctgaagaagatttgtttcactggtcgatcatcagagcaagagagactgaccatagag 955
Query: 2641 ttctggagagaggcgcagatcctatcaaatcttcaccatcctaatgtggtagcattttat 2700
|| ||| | ||||| | ||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 954 ttttggcgggaggctgaaatcctttcaaagcttcaccatccaaatgtggtagccttttat 895
Query: 2701 ggtgtagtccctgatggacctgggggaacaatggcgactgttactgaatatatggttaat 2760
||||| || | ||||||||||| || ||| | || ||||| || ||||| |||||| ||
Sbjct: 894 ggtgtggtgcaagatggacctggagggacattagctactgtgacagaatacatggttgat 835
Query: 2761 ggatcattgaggcatgtcttacaaaagaaggacaaagcacttgatcgtcgtaaaaagctt 2820
|| || | |||||||| |||| ||||||||| | || |||||||| || | ||||
Sbjct: 834 ggttctcttaggcatgttttactaaagaaggataggtatctagatcgtcgcaagaggctt 775
Query: 2821 atgattgcactggatgcagcttttggcatggaatatctacatctgaaag-atattgttca 2879
| || || ||||||| || ||||| ||||| ||||| || || |||| | ||||| ||
Sbjct: 774 ctaatagctatggatgctgcatttggaatggagtatcttca-ctcaaagaacattgtgca 716
Query: 2880 ttttgatttgaagtgtgataatttgcttgtgaatttgagagattcacaacgacccatttg 2939
||||||||||||||||| |||||||||||||| | | |||| | ||||| || || ||
Sbjct: 715 ctttgatttgaagtgtgacaatttgcttgtgaacctcaaagatccccaacggccaatctg 656
Query: 2940 caaggttggagattttggtttgtcaagaattaaacgcaatacactcgtatccggtggggt 2999
||||||||| |||||||||||||||| ||||||||| ||||| | || | || || ||
Sbjct: 655 caaggttggtgattttggtttgtcaaaaattaaacgaaataccttggtcactggaggtgt 596
Query: 3000 gcgtggaacccttccatggatggcaccagaattactcgatggcagcagcaatcgagtctc 3059
|| || || ||||||||||||||||||||| | || |||| ||||| || |||||
Sbjct: 595 acggggtactcttccatggatggcaccagaactgctaaatggtagcagtaacaaggtctc 536
Query: 3060 tgagaaggttgatgtttactcatttggtattgcaatgtgggagattttgactggtgaaga 3119
|||||||||||||||| ||| ||||| |||| ||||||||||| | |||||||| ||
Sbjct: 535 ggagaaggttgatgttttctcctttggaattgtcttgtgggagattctcactggtgagga 476
Query: 3120 gccatatgccaacatgcattgcggtgctatcataggcggaatcgtaagtaacacg 3174
|||||||||||||||||| | ||||| |||||||| || || |||| |||||||
Sbjct: 475 gccatatgccaacatgcactatggtgcaatcataggtgggattgtaaataacacg 421
>KJC_c01558
Length = 743
Score = 101 bits (51), Expect = 1e-20
Identities = 372/479 (77%)
Strand = Plus / Plus
Query: 2659 atcctatcaaatcttcaccatcctaatgtggtagcattttatggtgtagtccctgatgga 2718
||||| ||||| ||||| ||||| |||||||| ||||||||||| || || | ||||||
Sbjct: 252 atcctttcaaagcttcatcatccaaatgtggtggcattttatggagtggtgcaagatgga 311
Query: 2719 cctgggggaacaatggcgactgttactgaatatatggttaatggatcattgaggcatgtc 2778
||||| || ||| | || ||||| || || || |||||| |||| || | || ||||||
Sbjct: 312 cctggagggacattagctactgtgacagagtacatggttgatggttctcttagacatgtc 371
Query: 2779 ttacaaaagaaggacaaagcacttgatcgtcgtaaaaagcttatgattgcactggatgca 2838
|||| |||||||||||| || |||||||| || ||| |||| || |||||||
Sbjct: 372 ttactaaagaaggacaagtatctagatcgtcggaagcgacttctgatagctatggatgct 431
Query: 2839 gcttttggcatggaatatctacatctgaaagatattgttcattttgatttgaagtgtgat 2898
|| ||||| ||||| ||| | || ||| ||||||| |||||||||||||| |||||
Sbjct: 432 gcatttggaatggagtatttgcactcgaagaatattgtgcattttgatttgaaatgtgac 491
Query: 2899 aatttgcttgtgaatttgagagattcacaacgacccatttgcaaggttggagattttggt 2958
|| |||||||| || |||| |||| | || ||||| || ||||||||||| ||||||||
Sbjct: 492 aacttgcttgtcaacttgaaagatccccagcgaccaatctgcaaggttggtgattttggc 551
Query: 2959 ttgtcaagaattaaacgcaatacactcgtatccggtggggtgcgtggaacccttccatgg 3018
|||| | ||||||||| || || || || || ||||| ||||| ||||| || || |||
Sbjct: 552 ctgtcgaaaattaaacgaaacaccctggtttctggtggtgtgcggggaactctaccgtgg 611
Query: 3019 atggcaccagaattactcgatggcagcagcaatcgagtctctgagaaggttgatgtttac 3078
||||| || || | || |||| ||||||||| || || || || |||||||| | |
Sbjct: 612 atggctccggagctgctaaatgggagcagcaataaggtgtcagaaaaagttgatgtgttc 671
Query: 3079 tcatttggtattgcaatgtgggagattttgactggtgaagagccatatgccaacatgca 3137
|| ||||| |||| |||||||||| | || ||||| ||||| ||||||||||||||
Sbjct: 672 tcctttggaattgtcttgtgggagatcctcacaggtgatgagccgtatgccaacatgca 730
>KJC_c06357
Length = 525
Score = 85.7 bits (43), Expect = 6e-16
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 3004 ggaacccttccatggatggcaccagaattactcgatggcagcagcaatcgagtctctgag 3063
||||| ||||||||||||||||||||| | || |||||||||| | || || ||||||
Sbjct: 325 ggaacacttccatggatggcaccagaacttcttaatggcagcagtagtcttgtttctgag 266
Query: 3064 aaggttgatgtttactcatttggtattgcaatgtgggagattttgactggtgaagagcca 3123
||||||||||| | |||||||||| ||| ||||||| || | ||||| |||||||||
Sbjct: 265 aaggttgatgtgttctcatttggtgttgtgctgtgggaacttctaactggagaagagcca 206
Query: 3124 tatgccaacatgcattgcggtgctatcataggcgg 3158
||||| || |||| | ||| ||||| ||||||||
Sbjct: 205 tatgcagacttgcactacggggctattataggcgg 171