Jatropha Genome Database

JcCA0155001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0155001.10 + phase: 0 /partial/short
         (117 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c11464                                                            212   1e-55

>KJC_c11464 
          Length = 488

 Score =  212 bits (107), Expect = 1e-55
 Identities = 114/115 (99%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   cagattcatgagaacatgaaagctatcgacgtgatccccttgttaactcctgccgtgatg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cagattcatgagaacatgaaagctatcgacgtgatccccttgttaactcctgccgtgatg 356

                                                                  
Query: 64  gagaagattgaggctgttgtt-caaaccaagccaaaacgtccagattcttatagg 117
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 355 gagaagattgaggctgttgttacaaaccaagccaaaacgtccagattcttatagg 301