Jatropha Genome Database

JcCA0154731.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154731.20 + phase: 0 
         (1512 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09795                                                             56   3e-07

>KJC_c09795 
          Length = 468

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 97/120 (80%)
 Strand = Plus / Minus

                                                                        
Query: 1234 aacccagaagagttttgtcctgagagatttgtgggtaactccattgatttaaaagggcaa 1293
            ||||||||||| || |  ||||| |||||||||| || |||||||||||| ||||| |||
Sbjct: 299  aacccagaagaattcttccctgaaagatttgtggatagctccattgattttaaaggacaa 240

                                                                        
Query: 1294 gattacgagctaataccttttggagctggaagaagaatttgtcctggaatgtttatggga 1353
             |||  ||| |  | || ||||||||||| ||||||  |||||||| | ||| |||||||
Sbjct: 239  aattttgagtttctgccatttggagctggtagaagaggttgtcctgcactgtatatggga 180