Jatropha Genome Database
- JcCA0154641.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0154641.20 - phase: 0
(1197 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10172 1715 0.0
>KJC_c10172
Length = 1042
Score = 1715 bits (865), Expect = 0.0
Identities = 916/924 (99%), Gaps = 8/924 (0%)
Strand = Plus / Minus
Query: 275 aggggattagaattaggagacggccgccgacggggccgccgttgcattatgtgggtccct 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 aggggattagaattaggagacggccgccgacggggccgccgttgcattatgtgggtccct 983
Query: 335 ttgaatttcgcatacagaatgaagggaatactccgaggaacattcttgaggaaattgttt 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 ttgaatttcgcatacagaatgaagggaatactccgaggaacattcttgaggaaattgttt 923
Query: 395 ggaataaggacattgaggtctctcagttaaaagagagaaagcctctatcttcgttgaaga 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ggaataaggacattgaggtctctcagttaaaagagagaaagcctctatcttcgttgaaga 863
Query: 455 aatctcttgataatgctcctccagctagagattttattggtgcacttaaggaagctaata 514
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 862 aatctcttgataatgctcctccagctagagattttattggtgcactta--gaagctaata 805
Query: 515 ttagaactggatttcctggtttgattgctgaagtgaagaaggcttctccaagtagaggaa 574
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 804 ttagaactggatt-cctggtttgattgctgaagtgaagaaggcttctc-aagtagaggaa 747
Query: 575 ttataagggaggactttgatccagttgagatcgcccaagcttatgagaaaggtggtgctg 634
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ttataagg-aggactttgatccagttgagatcgcccaagcttatgagaaaggtggtgctg 688
Query: 635 catgtcttagtgttttgactgatgagaagtattttaaggggagcttcgaaaatctagagg 694
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 687 catgtcttagtgttttgactgatgagaagtattt-aaggggagcttcgaaaatctagagg 629
Query: 695 caataaggaatgcaggagtgaagtgcccactactgtgcaaagagtttgttatagatgcat 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 caataaggaatgcaggagtgaagtgcccactactgtgcaaagagtttgttatagatgcat 569
Query: 755 ggcagatctactatgcccgaactaaaggggcagatgcaattcttctaattgctgctgttt 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ggcagatctactatgcccgaactaaaggggcagatgcaattcttctaattgctgctgttt 509
Query: 815 tgcctgatctggacatcagatacatgactaaaatctgcaaaatgctgggtttggcagcac 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgcctgatctggacatcagatacatgactaaaatctgcaaaatgctgggtttggcagcac 449
Query: 875 ttgtagaggtgcatgacgagagggaaatggatcgtgttcttggaatagaagggattgagc 934
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 448 ttgtagaggtgcatgacgagagggaaatggatcgtg-tcttggaatagaagggattgagc 390
Query: 935 taattggtataaacaatcgtgatcttgaaacatttaaagttgatatcagt-aatacaaag 993
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 389 taattggtataaacaatcgtgatcttgaaacatttaaagttgatatcagtaaatacaaag 330
Query: 994 aagcttcttcaaggagaacgtggtgaacagatccgacaaaaaggcataattgtagttgga 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aagcttcttcaaggagaacgtggtgaacagatccgacaaaaaggcataattgtagttgga 270
Query: 1054 gaatctgggctgtttactcctgaggatattgcttatgtacaagaagctggtgtgaaagcg 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gaatctgggctgtttactcctgaggatattgcttatgtacaagaagctggtgtgaaagcg 210
Query: 1114 gttttggtgggagaatcgatcgtgaaacaaagtgaccccgggaagggaatagctggactt 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gttttggtgggagaatcgatcgtgaaacaaagtgaccccgggaagggaatagctggactt 150
Query: 1174 tttggtaaagatatttcacagtga 1197
||||||||||||||||||||||||
Sbjct: 149 tttggtaaagatatttcacagtga 126