Jatropha Genome Database

JcCA0154561.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154561.20 - phase: 0 /partial
         (438 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05925                                                            470   e-132

>KJC_c05925 
          Length = 545

 Score =  470 bits (237), Expect = e-132
 Identities = 237/237 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaaaagcattcggaggaatcctataatttagcatgtattcttactcttcctccttaccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gaaaagcattcggaggaatcctataatttagcatgtattcttactcttcctccttaccaa 178

                                                                       
Query: 61  aggaaaggctatggaaaatttttaattgccttctcgtatgaactttcaaagaaagagggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aggaaaggctatggaaaatttttaattgccttctcgtatgaactttcaaagaaagagggt 118

                                                                       
Query: 121 aaagttggtacacctgaaagaccactatctgacctagggttgttgagctacagaggatac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 aaagttggtacacctgaaagaccactatctgacctagggttgttgagctacagaggatac 58

                                                                    
Query: 181 tggaccagagttcttttggacatcttgaaaaagcacaagggcaatatttctatcaag 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  tggaccagagttcttttggacatcttgaaaaagcacaagggcaatatttctatcaag 1