Jatropha Genome Database

JcCA0154191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154191.10 + phase: 0 /partial
         (507 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09132                                                            537   e-153

>KJC_c09132 
          Length = 415

 Score =  537 bits (271), Expect = e-153
 Identities = 324/337 (96%), Gaps = 11/337 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   accttagtgctggagatcttcttcgagcagaaatcaaatctggatctgaaaatgggctac 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 80  accttagtgctggagatcttcttcgagcagaaatcaaatctggatctgaaaatgg----- 134

                                                                       
Query: 61  agaaccatgattcaaaacatgattaaggaggggaagattgtgccctcagaggtaacaata 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 --aaccatgattcaaaacatgattaaggaggggaagattgtgccctcagaggtaacaata 192

                                                                       
Query: 121 aagcttcttcaaaaagcaatgcgggaaagtggcaatgacaaatttttgattgatggtttt 180
           |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 193 aagcttct-caaaaggcaatgcgggaaagtggcaatgacaaattttttattgatggtttt 251

                                                                       
Query: 181 cctcgcaatgaggaaaaccgtgcagcatttgaatctgttaccaaaattgagccagaattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cctcgcaatgaggaaaaccgtgcagcatttgaatctgttaccaaaattgagccagaattt 311

                                                                       
Query: 241 gtcttattctttgactgttctgaagaagagatggagagacgccttttaagtaggaaccag 300
           ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 312 gtcttattctttgactgttctgaagaagagatggagagacg-cttttaag-aggaaccag 369

                                                
Query: 301 ggaagagaagatgataacattgagacaa-taaggaag 336
           |||||||||||||||||||||||||||| ||||||||
Sbjct: 370 ggaagagaagatgataacattgagacaagtaaggaag 406