Jatropha Genome Database

JcCA0154091.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154091.30 + phase: 0 
         (591 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09986                                                            724   0.0  

>KJC_c09986 
          Length = 481

 Score =  724 bits (365), Expect = 0.0
 Identities = 395/401 (98%), Gaps = 3/401 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaggatccaacaaacacaaacaactctaaaccaaatccaacgttagaaacacaaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  atgcaggatccaacaaacacaaacaactctaaaccaaatccaacgttagaaacacaaaac 140

                                                                       
Query: 61  tttcctcatggacaaccattttctttccggagctctggtcaccggcgggcacactccgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tttcctcatggacaaccattttctttccggagctctggtcaccggcgggcacactccgag 200

                                                                       
Query: 121 gtccatttccggcttcaggaagatctggatctcgtcacagatccattcgaaggaccatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtccatttccggcttcaggaagatctggatctcgtcacagatccattcgaaggaccatct 260

                                                                       
Query: 181 ggaagctccttcgatgagcttggatccgaggacgacctcttttgcacctacatggacatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaagctccttcgatgagcttggatccgaggacgacctcttttgcacctacatggacatt 320

                                                                       
Query: 241 gaaaagctcggatccagacccgaggaaggtccttcgggtctgaaacttgacaatgcggtt 300
           ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||
Sbjct: 321 gaaaagctcggatccagacccgaggaaggtccttcgggtcgtgaacttgacaatgcggtt 380

                                                                       
Query: 301 aatgggttaac-tgatggtggtggggtcc-aagtaggaagaattggcggcggggtggtcg 358
           ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 aatgggttaacgtgatggtggtggggtccgaagtaggaagaattggcggcggggtggtcg 440

                                                    
Query: 359 atgcggatgaagaaaagaatgtgaggcc-aagacataggta 398
           |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 atgcggatgaagaaaagaatgtgaggccgaagacataggta 481