Jatropha Genome Database

JcCA0154071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154071.10 + phase: 2 /partial
         (424 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00992                                                            841   0.0  

>KJC_c00992 
          Length = 1452

 Score =  841 bits (424), Expect = 0.0
 Identities = 424/424 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaccgtgtttttgagtacattggaacttatgccaaaaagttagaaatgctctctgtagc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589  tgaccgtgtttttgagtacattggaacttatgccaaaaagttagaaatgctctctgtagc 648

                                                                        
Query: 61   ctttgccggagatagtgatttggggctccatcatgtgatgtctggatgtgaaaacctacg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649  ctttgccggagatagtgatttggggctccatcatgtgatgtctggatgtgaaaacctacg 708

                                                                        
Query: 121  caaactagagattcgagattgtccatttggggacaaggctcttttggccaatgctgcaaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709  caaactagagattcgagattgtccatttggggacaaggctcttttggccaatgctgcaaa 768

                                                                        
Query: 181  gctggagacaatgcgatccctttggatgtcttcttgctcggtgagttacggagcatgtaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769  gctggagacaatgcgatccctttggatgtcttcttgctcggtgagttacggagcatgtaa 828

                                                                        
Query: 241  attgctaggtcagaagatgcctaggctcaatgttgaagttattgatgagaggggacctcc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829  attgctaggtcagaagatgcctaggctcaatgttgaagttattgatgagaggggacctcc 888

                                                                        
Query: 301  agattcaaggccagaaagttgtccagttgagaagctttacatctataggactgtcgctgg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889  agattcaaggccagaaagttgtccagttgagaagctttacatctataggactgtcgctgg 948

                                                                        
Query: 361  gcctagattcgacatgcctggttttgtttggacaatggatgaagattctgcattgaggct 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  gcctagattcgacatgcctggttttgtttggacaatggatgaagattctgcattgaggct 1008

                
Query: 421  ttct 424
            ||||
Sbjct: 1009 ttct 1012