Jatropha Genome Database
- JcCA0153791.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0153791.20 + phase: 0 /partial
(807 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05417 922 0.0
KJC_c04768 408 e-114
KJC_c03580 107 4e-23
>KJC_c05417
Length = 551
Score = 922 bits (465), Expect = 0.0
Identities = 465/465 (100%)
Strand = Plus / Minus
Query: 1 atgggttgttgccaatcttccttctttgaagtacgtgttccggaggaaaaagcctctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgggttgttgccaatcttccttctttgaagtacgtgttccggaggaaaaagcctctaac 406
Query: 61 aaccacaacaaccaccaccaccagaatcaccacccttgccatccgtccaatggcaccgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaccacaacaaccaccaccaccagaatcaccacccttgccatccgtccaatggcaccgaa 346
Query: 121 cctagcactgctgcctccggaggcatcccctctttcattgagttttccttagctgaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cctagcactgctgcctccggaggcatcccctctttcattgagttttccttagctgaccta 286
Query: 181 aaagccgctaccaacaactttagccctgagttcatcgtttctgaaagcggtgaaaaggcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aaagccgctaccaacaactttagccctgagttcatcgtttctgaaagcggtgaaaaggcg 226
Query: 241 cccaatgtcgtatataaaggccgcctacagaatcaggacaatcgcacttggatcgctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 cccaatgtcgtatataaaggccgcctacagaatcaggacaatcgcacttggatcgctgtt 166
Query: 301 aagaaatttacaaaacttgcctggcctgatccccagcagttcgctgatgaggcctggggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aagaaatttacaaaacttgcctggcctgatccccagcagttcgctgatgaggcctggggt 106
Query: 361 gttgggaagttgaggcacaagaggctagctaatttgatagggtactgctgcgacggggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gttgggaagttgaggcacaagaggctagctaatttgatagggtactgctgcgacggggac 46
Query: 421 gaaaggctattggtggcggagtacatgcccaatgatacccttgcc 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 gaaaggctattggtggcggagtacatgcccaatgatacccttgcc 1
>KJC_c04768
Length = 494
Score = 408 bits (206), Expect = e-114
Identities = 236/243 (97%), Gaps = 5/243 (2%)
Strand = Plus / Minus
Query: 567 tcgtccattgtaccacgatttaaatgcttatagggttctttttg--acgagaatggtgat 624
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 494 tcgtccattgtaccacgntttaaatgcttatagggttcttttttgtacgagaatggtgat 435
Query: 625 cctcggctttcgtgttttggcttgatgaaaaatagtagagatggaaaaagttacagcaca 684
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 434 cctcggctttcgtgttttggcttgatgaaaa-tagtagagatg--aaaagttacagcaca 378
Query: 685 aatcttgcttatacaccccccgagtatttaagaaatggaagggtcactcctgaaagtgtc 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aatcttgcttatacaccccccgagtatttaagaaatggaagggtcactcctgaaagtgtc 318
Query: 745 attttcagctttgggactgtcctcttggatcttctcagcggaaagcacatccctcctagt 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 attttcagctttgggactgtcctcttggatcttctcagcggaaagcacatccctcctagt 258
Query: 805 cat 807
|||
Sbjct: 257 cat 255
>KJC_c03580
Length = 1073
Score = 107 bits (54), Expect = 4e-23
Identities = 176/214 (82%), Gaps = 2/214 (0%)
Strand = Plus / Minus
Query: 595 tatagggttctttttgacgagaat-ggtgatcctcggctttcgtgttttggcttgatgaa 653
||||||||||| ||||||||| || || ||||| || || || |||||||||||||||||
Sbjct: 1073 tatagggttctgtttgacgaggataggagatccacgcctatcatgttttggcttgatgaa 1014
Query: 654 aaatagtagagatggaaaaagttacagcacaaatcttgcttatacaccccccgagtattt 713
||||| || ||||||||| |||| || ||||| ||||| || || || || |||||| |
Sbjct: 1013 gaatagcagggatggaaaa-gttatagtacaaaccttgcctacactcctcctgagtatct 955
Query: 714 aagaaatggaagggtcactcctgaaagtgtcattttcagctttgggactgtcctcttgga 773
|||||||||||| ||||| ||||||||||| || | || ||||| ||||| || ||||
Sbjct: 954 aagaaatggaagagtcacccctgaaagtgttatgtatagttttggtactgttcttctgga 895
Query: 774 tcttctcagcggaaagcacatccctcctagtcat 807
| | || || |||||||| |||||||| ||||||
Sbjct: 894 tttgctaagtggaaagcatatccctccaagtcat 861