Jatropha Genome Database

JcCA0153601.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0153601.20 + phase: 0 
         (723 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10013                                                            922   0.0  

>KJC_c10013 
          Length = 628

 Score =  922 bits (465), Expect = 0.0
 Identities = 465/465 (100%)
 Strand = Plus / Plus

                                                                       
Query: 216 ccgtgacctccttcagaattactataaagccctttgcttagttgaaactcgcttccctat 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccgtgacctccttcagaattactataaagccctttgcttagttgaaactcgcttccctat 60

                                                                       
Query: 276 ctctccggataaagatcacatcaatagtgtgacgtttgtgtggtacgatgcgtttaagca 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctctccggataaagatcacatcaatagtgtgacgtttgtgtggtacgatgcgtttaagca 120

                                                                       
Query: 336 gaagcagaaggcttcgcagcagaatattcatttagaaaaggctgcaattcttttcaattt 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagcagaaggcttcgcagcagaatattcatttagaaaaggctgcaattcttttcaattt 180

                                                                       
Query: 396 gggtgctgtgtatagtcagattgggctttcgtttgatcgcactactgtagaagggagacg 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggtgctgtgtatagtcagattgggctttcgtttgatcgcactactgtagaagggagacg 240

                                                                       
Query: 456 gcaggctattcattcgtttattgcagctgcaggggcgtttgcttatttgagagataatgc 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaggctattcattcgtttattgcagctgcaggggcgtttgcttatttgagagataatgc 300

                                                                       
Query: 516 agcgactaaggcgtcgatgggatcgagtacgaccgtcgatgtgtctgttgagtgtgtggg 575
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcgactaaggcgtcgatgggatcgagtacgaccgtcgatgtgtctgttgagtgtgtggg 360

                                                                       
Query: 576 aatgttggagaggttgatgctggctcaagcgcaggagtgtgtgtttgagaataccattgc 635
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgttggagaggttgatgctggctcaagcgcaggagtgtgtgtttgagaataccattgc 420

                                                        
Query: 636 taaagggagtactccaggggtctgcgctaagattgcgaggcaggt 680
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaagggagtactccaggggtctgcgctaagattgcgaggcaggt 465