Jatropha Genome Database
- JcCA0153521.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0153521.30 - phase: 0
(1545 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02083 2040 0.0
>KJC_c02083
Length = 1048
Score = 2040 bits (1029), Expect = 0.0
Identities = 1046/1049 (99%), Gaps = 2/1049 (0%)
Strand = Plus / Plus
Query: 353 ccgatgtcactttctccccttacggagcatactggcgacaagcgagaaagatctgcgtca 412
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgatgtcactttctccc-ttacggagcatactggcgacaagcgagaaagatctgcgtca 59
Query: 413 ctgagttacttagcgcgaaaagggtcagctcgtttcaacgggttcgagacgaggaggtga 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ctgagttacttagcgcgaaaagggtcagctcgtttcaacgggttcgagacgaggaggtga 119
Query: 473 atcggttgttagctgccgtgttggctcagtccgggaaggaagttgacatgagcaagcttt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atcggttgttagctgccgtgttggctcagtccgggaaggaagttgacatgagcaagcttt 179
Query: 533 tgtttaatttagctaatgatatattgtgtagagtagcgtttgggaggaggtttatcgagg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgtttaatttagctaatgatatattgtgtagagtagcgtttgggaggaggtttatcgagg 239
Query: 593 aagggaaagaagggaaaatggtgaatgttttgacagaaacacaagccttgtttgcagggt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aagggaaagaagggaaaatggtgaatgttttgacagaaacacaagccttgtttgcagggt 299
Query: 653 tttgtataggcgatttctttcccgactgggagtgggttaactcagtcagtgggtataaaa 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tttgtataggcgatttctttcccgactgggagtgggttaactcagtcagtgggtataaaa 359
Query: 713 -agaggttgatgaagaacttggaggatctaagagcagtatgcgatgatataatagaggaa 771
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aagaggttgatgaagaacttggaggatctaagagcagtatgcgatgatataatagaggaa 419
Query: 772 cacttgaagaagaagatggaaagcgatgatgaaaaggaagattttgtggatgttttgctt 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cacttgaagaagaagatggaaagcgatgatgaaaaggaagattttgtggatgttttgctt 479
Query: 832 agggttcaaaaaagagaggatttggaggtgcccatttctgatgataatctcaaggcttta 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 agggttcaaaaaagagaggatttggaggtgcccatttctgatgataatctcaaggcttta 539
Query: 892 gtgcttgacatgtttgttgctggaactgatacatcatcgtcaacactagaatggacattg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtgcttgacatgtttgttgctggaactgatacatcatcgtcaacactagaatggacattg 599
Query: 952 acagagctagcaaggcatccaagatttttaaagaaagcacaagaagaggtgagaaagatt 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acagagctagcaaggcatccaagatttttaaagaaagcacaagaagaggtgagaaagatt 659
Query: 1012 gcatcaggaaaaggaatggttgatgaaaatgatctccaacacctgcattacatgaaagct 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gcatcaggaaaaggaatggttgatgaaaatgatctccaacacctgcattacatgaaagct 719
Query: 1072 cttataaaggaatcaatgcgattgcacccaccagttcctcttcttgttcctcgagaatct 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cttataaaggaatcaatgcgattgcacccaccagttcctcttcttgttcctcgagaatct 779
Query: 1132 atggagaaatgcattcttgatggatatgaaatacctgccaaaactcgcattttgatcaat 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 atggagaaatgcattcttgatggatatgaaatacctgccaaaactcgcattttgatcaat 839
Query: 1192 tcctacgctattggaagggatccgaaattgtgggagaatcctcttgcgtacaatcccgag 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tcctacgctattggaagggatccgaaattgtgggagaatcctcttgcgtacaatcccgag 899
Query: 1252 aggtttgtagaaaacgatattgatatcaaggatcaggatttcaggtttctaccatttgga 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 aggtttgtagaaaacgatattgatatcaaggatcaggatttcaggtttctaccatttgga 959
Query: 1312 ggaggaaggcgaggttgccctggttataccttcggattagcaacaatcgagattgcactt 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 ggaggaaggcgaggttgccctggttataccttcggattagcaacaatcgagattgcactt 1019
Query: 1372 gctcgacttctataccattttgactgggc 1400
|||||||||||||||||||||||| ||||
Sbjct: 1020 gctcgacttctataccattttgacggggc 1048