Jatropha Genome Database
- JcCA0152991.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0152991.10 + phase: 0
(2415 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00346 137 1e-31
KJC_s18066 72 7e-12
KJC_c09985 56 4e-07
>KJC_c00346
Length = 2887
Score = 137 bits (69), Expect = 1e-31
Identities = 111/125 (88%)
Strand = Plus / Plus
Query: 1945 cgcttcatgatctatgttcatgccaaaatgatgatcgttgatgatgagtacataatcatc 2004
||||||||||| ||||||||| | || ||||||||||||||||||||||||||||| |
Sbjct: 2104 cgcttcatgatttatgttcattcaaagatgatgatcgttgatgatgagtacataatagtt 2163
Query: 2005 ggatcagccaacatcaaccagaggtcaatggatggtgcaagagactcagagatcgcaatg 2064
|| || |||||||||||||||||||||||||||||||| || |||||||| || || |||
Sbjct: 2164 gggtctgccaacatcaaccagaggtcaatggatggtgccagggactcagaaatagctatg 2223
Query: 2065 ggagc 2069
|||||
Sbjct: 2224 ggagc 2228
Score = 131 bits (66), Expect = 9e-30
Identities = 336/426 (78%)
Strand = Plus / Plus
Query: 1363 acatggaatgttcaattatttcgttccattgatggtggtgctgttgttggctttcctgaa 1422
||||||||||| || || ||| | |||||||||||||| |||| |||| || |||||
Sbjct: 1522 acatggaatgtccagttgtttagatccattgatggtggggctgcatttggtttccctgat 1581
Query: 1423 aggcctgaagatgcagctgcagttggccttgtaagtggaaaagacaacatcattgataga 1482
| || |||||||| || || ||| ||||| ||||||||||| || |||||||| ||
Sbjct: 1582 acacccgaagatgctgccagagctgggcttgttagtggaaaagataatatcattgaccga 1641
Query: 1483 agcattcaagatgcttatataaatgcaattcggcgggcaaagaattttatctacatagaa 1542
|||||||| ||||||||||| ||||| ||||| ||||||||||||| || || || |||
Sbjct: 1642 agcattcaggatgcttatatcaatgccattcgaagggcaaagaatttcatttatattgaa 1701
Query: 1543 aatcagtatttcattggaagctcatttgattggaaatcaaaagatataagagatgaggac 1602
|||||||| ||| ||||||| ||||||| ||||| | | | ||| | |||||
Sbjct: 1702 aatcagtacttccttggaagttcatttggttggagtcctgatggtattaagcccgaggat 1761
Query: 1603 atcaatgccttgcatcttattccgaaagagctatcattaaaaatagttagtaaaatagat 1662
|| ||||| |||||||| ||||| || || || ||| | || |||||||| || || ||
Sbjct: 1762 attaatgcattgcatctaattcccaaggaactttcacttaagatagttagcaagattgag 1821
Query: 1663 gcaggagaaaggtttacagtttacattgtgattccaatgtggcctgaaggtattcctgag 1722
||||| || ||||| || || || |||| ||||||||||||| || || || || |||
Sbjct: 1822 gcaggggagaggttcactgtctatgttgttgttccaatgtggccagagggcatcccagag 1881
Query: 1723 agtgattcagttcaagcaattctagattggcaaagaagaacaatggagatgatgtattat 1782
|||| |||||||||||||| |||||||||| ||||||||| |||| ||||||||| |
Sbjct: 1882 agtggatcagttcaagcaatattagattggcagagaagaacagtggaaatgatgtataag 1941
Query: 1783 gatatt 1788
||||||
Sbjct: 1942 gatatt 1947
Score = 58.0 bits (29), Expect = 1e-07
Identities = 77/93 (82%)
Strand = Plus / Plus
Query: 619 tgggaagaaatttttgatgctattagtaatgctaagcatttgatttacataactggttgg 678
|||||||| |||||||||| |||| ||||| || ||| |||| ||||| ||||| |||
Sbjct: 779 tgggaagatgtttttgatgcaattacgaatgcaaaacatctgatctacatcactggctgg 838
Query: 679 tctgtgaatactgaaataactctggtaagagat 711
||||| |||||||||| || |||||||||||
Sbjct: 839 tctgtttatactgaaatcaccttggtaagagat 871
Score = 56.0 bits (28), Expect = 4e-07
Identities = 78/92 (84%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 898 cattgcgttttgcgccctcgaaatcctgatgatggaagaagcaaagttcaaggatttgc- 956
||||| |||||| | |||||||||||||||||||| |||||| ||||| ||||| | |
Sbjct: 1058 cattgtgttttgtgtcctcgaaatcctgatgatggtggaagcatagttc-aggatctaca 1116
Query: 957 aatctctactatgtttactcaccatcagaaaa 988
||||||||| ||||| ||||| || |||||||
Sbjct: 1117 aatctctaccatgttcactcatcaccagaaaa 1148
>KJC_s18066
Length = 243
Score = 71.9 bits (36), Expect = 7e-12
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 1363 acatggaatgttcaattatttcgttccattgatggtggtgctgttgttggctttcctgaa 1422
||||||||||| || || ||| | |||||||||||||| |||| |||| || |||||
Sbjct: 90 acatggaatgtccagttgtttagatccattgatggtggggctgcatttggtttccctgat 149
Query: 1423 aggcctgaagatgcagctgcagttggccttgtaagtggaaaagacaacatcattgataga 1482
| || |||||||| || || ||| ||||| ||||||||||| || |||||||| ||
Sbjct: 150 acacccgaagatgctgccagagctgggcttgttagtggaaaagataatatcattgaccga 209
Query: 1483 agcattcaagatgcttatataaatgcaattcg 1514
|||||||| ||||||||||| ||||| |||||
Sbjct: 210 agcattcaggatgcttatatcaatgccattcg 241
>KJC_c09985
Length = 518
Score = 56.0 bits (28), Expect = 4e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 2005 ggatcagccaacatcaaccagaggtcaatggatggtgcaagagactcagagatcgcaatg 2064
||||| ||||| ||||||||||| || |||| |||| ||| |||| | ||||| ||||||
Sbjct: 116 ggatctgccaatatcaaccagagatccatggctggtacaaaagacactgagatagcaatg 57
Query: 2065 ggagcatttcaacctcatca 2084
|| |||| |||||| |||||
Sbjct: 56 ggtgcatatcaaccccatca 37