Jatropha Genome Database

JcCA0152741.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0152741.20 + phase: 0 
         (534 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c12574                                                            329   4e-90

>KJC_c12574 
          Length = 336

 Score =  329 bits (166), Expect = 4e-90
 Identities = 173/174 (99%), Gaps = 1/174 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaaacaaagaacaagtatgtgtaacaggtgcaggagggtacttggcatcatggttg 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atgtcaaacaaaga-caagtatgtgtaacaggtgcaggagggtacttggcatcatggttg 222

                                                                       
Query: 61  gtgaagcttctcctctcaaagggttacatcgtgcatggaacagtgagagatccaagtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gtgaagcttctcctctcaaagggttacatcgtgcatggaacagtgagagatccaagtgat 282

                                                                 
Query: 121 aacaagaatgcacatctaaagaaattggataacgctactgagaatctgaaactc 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aacaagaatgcacatctaaagaaattggataacgctactgagaatctgaaactc 336