Jatropha Genome Database
- JcCA0152721.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0152721.10 + phase: 0 /partial
(888 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00127 1760 0.0
KJC_c01349 186 6e-47
KJC_c01524 101 3e-21
KJC_c01321 68 4e-11
>KJC_c00127
Length = 1728
Score = 1760 bits (888), Expect = 0.0
Identities = 888/888 (100%)
Strand = Plus / Minus
Query: 1 atggccttgcctacctctgctattggatttgaaggctatgaaaagaggcttgaagtgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 atggccttgcctacctctgctattggatttgaaggctatgaaaagaggcttgaagtgtcc 1191
Query: 61 ttttctgagcctggcttctttgctgaccccggagggatgggcctccgttctctgtccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 ttttctgagcctggcttctttgctgaccccggagggatgggcctccgttctctgtccaaa 1131
Query: 121 gctcaaatagatgagattctaaagccagctgaatgcaccattgttgattctctttcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 gctcaaatagatgagattctaaagccagctgaatgcaccattgttgattctctttcaaat 1071
Query: 181 gatcatgttgactcttatgttctttcagaatctagtctctttatttacccatacaaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 gatcatgttgactcttatgttctttcagaatctagtctctttatttacccatacaaagtt 1011
Query: 241 atcatcaaaacttgtgggactaccaaattgcttctttcaatcccagcaattcttaaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 atcatcaaaacttgtgggactaccaaattgcttctttcaatcccagcaattcttaaattg 951
Query: 301 gctggtaccctctcactcactgtacattctgtgaggtattctcgcgggagcttcatattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 gctggtaccctctcactcactgtacattctgtgaggtattctcgcgggagcttcatattt 891
Query: 361 cctggggctcagtcttttccgcatcgtagcttctctgaggaggtggctgtccttgatggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 cctggggctcagtcttttccgcatcgtagcttctctgaggaggtggctgtccttgatggc 831
Query: 421 cattttggcaaacttggtttggagagtgtggcatatgtgatgggtagtcctgacaaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 cattttggcaaacttggtttggagagtgtggcatatgtgatgggtagtcctgacaaaacc 771
Query: 481 caaaaatggcatgtttactctgcttctcttgacacagggcgccactctagctctgttcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 caaaaatggcatgtttactctgcttctcttgacacagggcgccactctagctctgttcaa 711
Query: 541 actctagaaatgtgcatgactggcttggacagagaccgagcatctgtgttttacaagaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 actctagaaatgtgcatgactggcttggacagagaccgagcatctgtgttttacaagaca 651
Query: 601 cctgcaagttcagctgctgggatgaccgaggaatctggtatcaggaaaatccttccacaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 cctgcaagttcagctgctgggatgaccgaggaatctggtatcaggaaaatccttccacaa 591
Query: 661 tctgagatatgtgattttgattttgagccttgtggctactctatgaattccatcgaaggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tctgagatatgtgattttgattttgagccttgtggctactctatgaattccatcgaaggg 531
Query: 721 ggtgcaatttctacaatccatgttactccggaagacggatttagctatgcaagctttgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ggtgcaatttctacaatccatgttactccggaagacggatttagctatgcaagctttgaa 471
Query: 781 gctgttggttacaatcttgaacaagtgaaattaactctgctgctcgaaagggtgttggct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gctgttggttacaatcttgaacaagtgaaattaactctgctgctcgaaagggtgttggct 411
Query: 841 tgctttgaaccggccgagttctccattgcattgcattctgactttgtg 888
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgctttgaaccggccgagttctccattgcattgcattctgactttgtg 363
>KJC_c01349
Length = 602
Score = 186 bits (94), Expect = 6e-47
Identities = 115/118 (97%), Gaps = 3/118 (2%)
Strand = Plus / Plus
Query: 1 atggccttgcctacctctgctattggatttgaaggctatg-aaaagaggcttgaagtgtc 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 487 atggccttgcctacctctgctattggatttgaaggctatgaaaaagaggcttgaagtgtc 546
Query: 60 cttttctgagcctggcttctttgctgaccccggagggatgggcctccgttctctgtcc 117
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 547 cttttctgagcctggcttc-ttgctga-cccggagggatgggcctccgttctctgtcc 602
>KJC_c01524
Length = 1484
Score = 101 bits (51), Expect = 3e-21
Identities = 231/291 (79%)
Strand = Plus / Plus
Query: 148 gctgaatgcaccattgttgattctctttcaaatgatcatgttgactcttatgttctttca 207
|||||||| || ||||||||||| | |||||| ||||||||||||||||| |||||
Sbjct: 1063 gctgaatgtactattgttgattcattgaaaaatgaccatgttgactcttatgtcctttct 1122
Query: 208 gaatctagtctctttatttacccatacaaagttatcatcaaaacttgtgggactaccaaa 267
|| ||||| |||||||| || || ||||| |||| |||||||| ||||||||||| ||
Sbjct: 1123 gagtctagcctctttatatatccttacaagcttataatcaaaacctgtgggactacaaag 1182
Query: 268 ttgcttctttcaatcccagcaattcttaaattggctggtaccctctcactcactgtacat 327
|||||||| |||||||| ||||| | || || || | | || || || | || |
Sbjct: 1183 ctgcttcttgcaatcccaccaattttgaagctgtctaatgctctgtcccttaaagtgaaa 1242
Query: 328 tctgtgaggtattctcgcgggagcttcatatttcctggggctcagtcttttccgcatcgt 387
|| |||||||| |||| ||||||||||| || ||||| |||||||||| ||| |||||
Sbjct: 1243 tccgtgaggtacactcgtgggagcttcattttccctggagctcagtcttatcctcatcgc 1302
Query: 388 agcttctctgaggaggtggctgtccttgatggccattttggcaaacttggt 438
|||||| |||| || || |||||||| |||| |||| ||||||||||||
Sbjct: 1303 agcttcactgaagaagttgctgtcctagatgattatttcggcaaacttggt 1353
>KJC_c01321
Length = 863
Score = 67.9 bits (34), Expect = 4e-11
Identities = 94/114 (82%)
Strand = Plus / Minus
Query: 667 atatgtgattttgattttgagccttgtggctactctatgaattccatcgaagggggtgca 726
||||| |||||||||||||| || ||||| ||||| |||||||| || ||||| |||
Sbjct: 491 atatgcgattttgattttgatccatgtggttactcaatgaattcaattgaaggttctgct 432
Query: 727 atttctacaatccatgttactccggaagacggatttagctatgcaagctttgaa 780
|| ||||| || ||| ||||||| ||||| || || |||||||| |||||||||
Sbjct: 431 atatctaccattcatattactccagaagatggtttcagctatgctagctttgaa 378
Score = 54.0 bits (27), Expect = 6e-07
Identities = 76/91 (83%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 349 agcttcatatttcc-tggggctcagtcttttccgcatcgtagcttctctgaggaggtggc 407
|||||||| ||||| ||| |||||||||| ||| ||||| |||||| |||| || || ||
Sbjct: 817 agcttcatttttccctggagctcagtcttatcctcatcgcagcttcactgaagaagttgc 758
Query: 408 tgtccttgatggccattttggcaaacttggt 438
|||||| |||| |||| ||||||||||||
Sbjct: 757 tgtcctagatgattatttcggcaaacttggt 727