Jatropha Genome Database

JcCA0152621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0152621.10 - phase: 0 /partial
         (474 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10766                                                            100   6e-21

>KJC_c10766 
          Length = 323

 Score = 99.6 bits (50), Expect = 6e-21
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                       
Query: 79  ttaactgaggttgtcatgccttgtgtatcaggcattggccttttatgtaagattatgaac 138
           ||||||||||| |||||||||||  |||| |||||||| ||||| || |||||||||| |
Sbjct: 171 ttaactgaggtagtcatgccttgcttatctggcattggtcttttgtgcaagattatgagc 230

                                                             
Query: 139 cacaaaacctgcaagaatattcctgtgattatgatgtcatctcatgattc 188
           ||||||||  |||||||  ||||||| || |||||||| |||||||||||
Sbjct: 231 cacaaaacacgcaagaacgttcctgtcatcatgatgtcgtctcatgattc 280