Jatropha Genome Database
- JcCA0152411.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0152411.20 + phase: 0
(630 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05430 1178 0.0
>KJC_c05430
Length = 672
Score = 1178 bits (594), Expect = 0.0
Identities = 625/630 (99%), Gaps = 4/630 (0%)
Strand = Plus / Minus
Query: 1 atgggttggttaactcgatttctagctgcggtggctttcttagccatcggagtgatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgggttggttaactcgatttctagctgcggtggctttcttagccatcggagtgatattt 602
Query: 61 tctccagaaacatttggatcaaaatccgttagtcagttatcgacttacttgaaactggct 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tctccagaaacatt-ggatcaaaatccgttagtcagttatcgacttacttgaaactggct 543
Query: 121 cacctgctcagcttttccacggcgtttggtgcggctctttgggttaccttcatcggtggc 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cgcctgctcagcttttccacggcgtttggtgcggctctttgggttaccttcatcggtggc 483
Query: 181 atcataatgttcaagaacctacctagacatcagtttggtaatttgcaaagcaagatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atcataatgttcaagaacctacctagacatcagtttggtaatttgcaaagcaagatgttt 423
Query: 241 cctgcatatttttggttggtgggtgtgtgttgtgcaacatcagtgggatcatttggttac 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cctgcatatttttggt-ggtgggtgtgtgttgtgcaacatcagtgggatcatttggttac 364
Query: 301 ctgcacccatggaaatctgcatccactgcagagaagtaccagctgggctttttgctttcc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 363 ctgcacccatggaaatctgcatccactgcagagaagtaccagctgggctttt-gctttcc 305
Query: 361 tccttggctttcaaccttgccaacttgtttgtctttacacccatgactattgagatgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tccttggctttcaaccttgccaacttgtttgtctttacacccatgactattgagatgatg 245
Query: 421 agacaaaggcacaaggtggagcgagaggagaacatcgggactgaagttgggtggtcaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agacaaaggcacaaggtggagcgagaggagaacatcgggactgaagttgggtggtcaaag 185
Query: 481 aaccaggaagctgcaaagactaatccaaagcttgctgccatgaacaagaaatttggcatg 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 184 aaccaggaagctgcaaagactaatccaaagcttgctgccatgaacaag-aatttggcatg 126
Query: 541 atccatggtttttcatctcttgctaatattatgtcttttggtggtcttgccatgcactcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atccatggtttttcatctcttgctaatattatgtcttttggtggtcttgccatgcactcg 66
Query: 601 tggtacttagcaggtaagctaaatctgtaa 630
||||||||||||||||||||||||||||||
Sbjct: 65 tggtacttagcaggtaagctaaatctgtaa 36