Jatropha Genome Database
- JcCA0151951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0151951.10 + phase: 0 /pseudo/partial
(1047 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12925 882 0.0
KJC_c04264 337 3e-92
KJC_s19192 323 5e-88
>KJC_c12925
Length = 445
Score = 882 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Minus
Query: 426 ttccaaggatgaaagtctctctctggtgcttatgcattcaagaaatgacctacaacttga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttccaaggatgaaagtctctctctggtgcttatgcattcaagaaatgacctacaacttga 386
Query: 486 tgcatctggtttatccacacaaaatgtctatccatattatatgtcaggagttgtgaacca 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcatctggtttatccacacaaaatgtctatccatattatatgtcaggagttgtgaacca 326
Query: 546 agttttaatgccttcatcagcacaactgtatcaaaagaatcttcatgagctgcaaactaa 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agttttaatgccttcatcagcacaactgtatcaaaagaatcttcatgagctgcaaactaa 266
Query: 606 tgtgccttcagctataatgcctcaatacaatcatctgcaacaatgttcccctcatgtgac 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtgccttcagctataatgcctcaatacaatcatctgcaacaatgttcccctcatgtgac 206
Query: 666 tggaatggcatcattcccctattaccctgttaacatatgtttacaacctggtcaaatgcc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tggaatggcatcattcccctattaccctgttaacatatgtttacaacctggtcaaatgcc 146
Query: 726 tactgctcattcatggccatcatttggaaattcatcttctgctgatgtgaaaatcaataa 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tactgctcattcatggccatcatttggaaattcatcttctgctgatgtgaaaatcaataa 86
Query: 786 agtagatagaagggaagcagcattgatgaagtttagacagaaaaggaaagaacgttgctt 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 agtagatagaagggaagcagcattgatgaagtttagacagaaaaggaaagaacgttgctt 26
Query: 846 tgataagaagattaggtatgttaat 870
|||||||||||||||||||||||||
Sbjct: 25 tgataagaagattaggtatgttaat 1
>KJC_c04264
Length = 642
Score = 337 bits (170), Expect = 3e-92
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 8 gcttggattggtggagaagaacatcttgagttatgactttgatctggtggcatcagatcc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcttggattggtggagaagaacatcttgagttatgactttgatctggtggcatcagatcc 416
Query: 68 tagtgatgccaatacaaatagcactactctgttctcagatgacacagatgacaggtctag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tagtgatgccaatacaaatagcactactctgttctcagatgacacagatgacaggtctag 356
Query: 128 gaagtgcacaaacccagaaataggcatatcaattcatcaggaagatgagt 177
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaagtgcacaaacccagaaataggcatatcaattcatcaggaagatgagt 306
Score = 137 bits (69), Expect = 6e-32
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 208 ttgagtctttgcctagcaatccactagagtatcggcctgatgtgcctaaaataagtgacc 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttgagtctttgcctagcaatccactagagtatcggcctgatgtgcctaaaataagtgacc 216
Query: 268 gtagaacag 276
|||||||||
Sbjct: 215 gtagaacag 207
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 277 cctgttaatggtactcaattacatgaaaat 306
||||||||||||||||||||||||||||||
Sbjct: 30 cctgttaatggtactcaattacatgaaaat 1
>KJC_s19192
Length = 397
Score = 323 bits (163), Expect = 5e-88
Identities = 184/187 (98%), Gaps = 3/187 (1%)
Strand = Plus / Plus
Query: 277 cctgttaatggtactcaattacatgaaaatggggagacacgagagagctattcacaagat 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cctgttaatggtactcaattacatgaaaatggggagacacgagagagctattcacaagat 270
Query: 337 gaattttgtcgcagttctagtgtccctgattctatatcaatggagagatcttgca-cccc 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 271 gaattttgtcgcagttctagtgtccctgattctatatcaatggagagatcttgcaccccc 330
Query: 396 acccatgtcaagggaa-tttcctcaaaagaattcc-aaggatgaaagtctctctctggtg 453
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 331 acccatgtcaagggaattttcctcaaaagaattccaaaggatgaaagtctctctctggtg 390
Query: 454 cttatgc 460
|||||||
Sbjct: 391 cttatgc 397