Jatropha Genome Database
- JcCA0151631.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0151631.20 + phase: 0 /partial
(1144 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04568 1659 0.0
>KJC_c04568
Length = 884
Score = 1659 bits (837), Expect = 0.0
Identities = 876/887 (98%), Gaps = 3/887 (0%)
Strand = Plus / Minus
Query: 161 gaaacattcaccaacttattggctctctaccccatcattgcctaagagacttggcnnnnn 220
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gaaacattcaccaacttattggctctctaccccatcattgcctaagagacttggcaaaaa 825
Query: 221 nncatggaggcattatgcatcttcagcttggtgaagtttctaatatagttatctcttctc 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 a-catggaggcattatgcatcttcagcttggtgaagtttctaatatagttatctcttctc 766
Query: 281 ctgaagctgcaaaagaagtgatgaagactcatgatattgtctttgctcaaagaccttttc 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ctgaagctgcaaaagaagtgatgaagactcatgatattgtctttgctcaaagaccttttc 706
Query: 341 ttttagctgcaagtattataagttataacttcacagacattgctttttcaccatatgcag 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ttttagctgcaagtattataagttataacttcacagacattgctttttcaccatatgcag 646
Query: 401 attactggagacagctgcgaaaaatctgcatactcgaattgctaagcgcaaaacgcgtgc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 attactggagacagctgcgaaaaatctgcatactcgaattgctaagcgcaaaacgcgtgc 586
Query: 461 agtcatttaggtttattagagaagaagaagtatcaaacttgattactgcaatttcttctt 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 agtcatttaggtttattagagaagaagaagtatcaaacttgattactgcaatttcttctt 526
Query: 521 cttcaggaaaggcattcaattttagtaggaaattgttttctttaacttatgggattgctg 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cttcaggaaaggcattcaattttagtaggaaattgttttctttaacttatgggattgctg 466
Query: 581 cgcgagcaacttttggcgagaaatgtgaagatcaagaggaatttataccaattgttgagg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cgcgagcaacttttggcgagaaatgtgaagatcaagaggaatttataccaattgttgagg 406
Query: 641 aaattacagaagtagcaggaggatttagtcttgcagatttgtttccttctgttaagtttc 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaattacagaagtagcaggaggatttagtcttgcagatttgtttccttctgttaagtttc 346
Query: 701 ttcattcgattagtggaatgaggtctagactcattaggctgcaaaaagaagctgataggg 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttcattcgattagtggaatgaggtctagactcattaggctgcaaaaagaagctgataggg 286
Query: 761 tgattggaaatattattgatgatcatagagcaaagaataaaacaggaaaggttggtggcg 820
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tga-tggaaatattattgatgatcatagagcaaagaataaaacaggaaaggttggtggcg 227
Query: 821 aaggccaagatgatgatcttgttgatgttcttttgaggcttcaagagcatggaaatcttg 880
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 226 aaggccaagatgatgatcttgttgatg-tcttttgaggcttcaagagcatggaaatcttg 168
Query: 881 aatttccgttgacgactgataatatcaaggcagtcatcctggatattttcgttgcgggta 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aatttccgttgacgactgataatatcaaggcagtcatcctggatattttcgttgcgggta 108
Query: 941 gtgagacatcatcaacaacagtagaatgggcgatgtccgaaatgctgaggaatccaagag 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gtgagacatcatcaacaacagtagaatgggcgatgtccgaaatgctgaggaatccaagag 48
Query: 1001 ttatgtacaaggcacaagaagaggtgagaaaattgttcgataaaaag 1047
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 47 ttatgtacaaggcacaagaagagaggagaaaattgttcgataaaaag 1