Jatropha Genome Database
- JcCA0151401.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0151401.20 - phase: 1 /pseudo/partial
(1043 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02385 2032 0.0
>KJC_c02385
Length = 1191
Score = 2032 bits (1025), Expect = 0.0
Identities = 1042/1045 (99%), Gaps = 2/1045 (0%)
Strand = Plus / Plus
Query: 1 cgttgaaatcctcttgccatggaagaggaaagtagtagccataatcgaagtgaagaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cgttgaaatcctcttgccatggaagaggaaagtagtagccataatcgaagtgaagaagaa 108
Query: 61 ggaactcaaggaagctcgcaggcgattgattt-gttgaagatagaagctacaaaagactc 119
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 109 ggaactcaaggaagctcgcaggcgattgattttgttgaagatagaagctacaaaagactc 168
Query: 120 aaatctcctgaaaa-tgaagatcgcattagtgccttacatgattccctcacccatcacat 178
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 aaatctcctgaaaaatgaagatcgcattagtgccttacatgattccctcacccatcacat 228
Query: 179 cctctcctttctgccatcaacagaagacgttattaaaactagcgttttatctaaacggtg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctctcctttctgccatcaacagaagacgttattaaaactagcgttttatctaaacggtg 288
Query: 239 gcaatacatatggacccatgtcccaaacctcactttcgaactcggcgaaagttacaaatc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gcaatacatatggacccatgtcccaaacctcactttcgaactcggcgaaagttacaaatc 348
Query: 299 tgttagacagttcgccagtttcgttgacaaagccctaattcagtacgcttctccgaaaat 358
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgttagatagttcgccagtttcgttgacaaagccctaattcagtacgcttctccgaaaat 408
Query: 359 caagaactttgctattgacatcgatcataatggaaggtggcttagcaagctgcaaccaag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caagaactttgctattgacatcgatcataatggaaggtggcttagcaagctgcaaccaag 468
Query: 419 aattgaatcgtgggttcgttttgccactgaacgtgaagtggaaaagcttgctttggacct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aattgaatcgtgggttcgttttgccactgaacgtgaagtggaaaagcttgctttggacct 528
Query: 479 ttttgaacacgacgattgggatcattatactttgccccaattcttgtacaagaaccattg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttttgaacacgacgattgggatcattatactttgccccaattcttgtacaagaaccattg 588
Query: 539 gttgcgtgaattgaagaccacacgttgtgattacgcgattgatggaaatgtggagtggag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gttgcgtgaattgaagaccacacgttgtgattacgcgattgatggaaatgtggagtggag 648
Query: 599 gtcactcaaggttttggatatatacgagtctaatttgacagatgaagttgttgaaaatat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gtcactcaaggttttggatatatacgagtctaatttgacagatgaagttgttgaaaatat 708
Query: 659 tctatctggcagtccgatgctagaatctttaaaactgcactggtgtccaaggattcatcg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tctatctggcagtccgatgctagaatctttaaaactgcactggtgtccaaggattcatcg 768
Query: 719 cattgatgtttcatcaaaatgtttgaaaaaattggtgatagatggagttgcagaaggcta 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 cattgatgtttcatcaaaatgtttgaaaaaattggtgatagatggagttgcagaaggcta 828
Query: 779 tgaagatgaagaagatgattcactgcttgaaatctccagtccttacgtggaaaaactgaa 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tgaagatgaagaagatgattcactgcttgaaatctccagtccttacgtggaaaaactgaa 888
Query: 839 aattcttgccgattggggtaaaaggaagtgtaagttaatgaatgtgtcatccttggtcag 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 aattcttgccgattggggtaaaaggaagtgtaagttaatgaatgtgtcatccttggtcag 948
Query: 899 tgttacactcgatttttacttggaagttgacaaagaacgtggtaataagttgtataagta 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 tgttacactcgatttttacttggaagttgacaaagaacgtggtaataagttgtataagta 1008
Query: 959 tgtcaagtatcaaaatcttgtgaggcagcttcttgagaaggttcatcatgttaaggagct 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 tgtcaagtatcaaaatcttgtgaggcagcttcttgagaaggttcatcatgttaaggagct 1068
Query: 1019 aaaaattgggaattggtgtattcag 1043
|||||||||||||||||||||||||
Sbjct: 1069 aaaaattgggaattggtgtattcag 1093