Jatropha Genome Database
- JcCA0151401.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0151401.10 - phase: 2 /pseudo/partial
(814 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09994 1003 0.0
KJC_c11676 161 3e-39
>KJC_c09994
Length = 520
Score = 1003 bits (506), Expect = 0.0
Identities = 520/522 (99%), Gaps = 2/522 (0%)
Strand = Plus / Minus
Query: 125 cagtgggatgggagggaagctactagaatagtaggaaagactcccttggaagctgctact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cagtgggatgggagggaagctactagaatagtaggaaagactcccttggaagctgctact 461
Query: 185 gctgttgtggaagattatgggcttccttgttcaacagaagaatttatcacagagctcacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gctgttgtggaagattatgggcttccttgttcaacagaagaatttatcacagagctcacc 401
Query: 245 cctatgttctccgctcagatgtgcaaaattaaagcacttcccggtgccaatcgcttaatt 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 400 cctatgttctccgctcagatgtgcaaaattaa-gcacttcccggtgccaatcgcttaatt 342
Query: 305 aagcatttgaggggtcataatgtgcctatggcattagcatcaaactctccaagggcaaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aagcatttgaggggtcataatgtgcctatggcattagcatcaaactctccaagggcaaat 282
Query: 365 gtagaatccaaaatttcacatcaccagggctggaaggaatccttctctgtcattattggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gtagaatccaaaatttcacatcaccagggctggaaggaatccttctctgtcattattggc 222
Query: 425 ggtgatgaagtgaaaactggtaaaccatctccagaaatatttttggaagcagctagaagg 484
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ggtgatgaagtgaaa-ctggtaaaccatctccagaaatatttttggaagcagctagaagg 163
Query: 485 ctaaatattgatccctccagttgcctagtcattgaagattctttgccaggtgttactggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ctaaatattgatccctccagttgcctagtcattgaagattctttgccaggtgttactggt 103
Query: 545 ggtaaggctgctggcatggcagtagttgctgtaccatcatttccaaaacagtcccatctt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ggtaaggctgctggcatggcagtagttgctgtaccatcatttccaaaacagtcccatctt 43
Query: 605 tatacatcagcagatgaagtgatgaactctctacttgattta 646
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tatacatcagcagatgaagtgatgaactctctacttgattta 1
>KJC_c11676
Length = 214
Score = 161 bits (81), Expect = 3e-39
Identities = 102/105 (97%), Gaps = 3/105 (2%)
Strand = Plus / Minus
Query: 710 ccttggcatattggtggtcctgtaattaagggatttggtcgtggctcaaaggttcttggg 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 202 ccttggcatattggtggtcctgtaattaagggatttggtcgtggctcaaaggttctt-gg 144
Query: 770 gtacccactgctaatatattcaacagaaggttattcaacagtgct 814
|||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 143 gtacccactgctaatata-tcaacagaagg-tattcaacagtgct 101