Jatropha Genome Database
- JcCA0150641.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0150641.20 + phase: 0
(972 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04107 155 2e-37
KJC_c04629 117 5e-26
>KJC_c04107
Length = 1005
Score = 155 bits (78), Expect = 2e-37
Identities = 319/398 (80%), Gaps = 1/398 (0%)
Strand = Plus / Minus
Query: 444 gcaatttgataatcctgcgaatccacagattcattatgaaaccactggaccagaaatatg 503
||||||||| |||||||| || ||| ||||||| ||||| ||||| |||||||| || ||
Sbjct: 412 gcaatttgagaatcctgccaacccaaagattcactatgagaccaccggaccagagatctg 353
Query: 504 gagagactcaagagggaaagttgatgccctggttgcagggattggaaccggtggaaccgt 563
|| || |||| | |||||||||||||| || ||| | |||||||| || || || || ||
Sbjct: 352 gaaaggctcaggtgggaaagttgatgctcttgtttccgggattgggactgggggtacagt 293
Query: 564 gactggagctgggaaattcctcaaggagaaaaacacagagatcaaggtgtatggtgtaga 623
|| || || |||| || ||||||||| ||||| | || || ||| |||||| ||||
Sbjct: 292 tacaggtgcagggagatatctcaaggagcaaaaccctgatataaagacctatggtataga 233
Query: 624 accggctgaaagtgcagtcttaaatggaggaaatcctggtccacatctgatccagggtat 683
||| | ||||||||| || || |||||| || || || |||||| |||||| || ||
Sbjct: 232 accagttgaaagtgctgtgttgtctggagggaa-ccaggcccacataagatccaaggaat 174
Query: 684 tggtgctggtataatccctagtgttttggatgttgacttgctagatgaagttcttcaagt 743
||||||||| | || ||| | |||||||| || | || ||||||||| |||||||
Sbjct: 173 tggtgctggctttattcctggagttttggacgtcagtctacttgatgaagttgttcaagt 114
Query: 744 atcaagtgaagaagctattgaaactgctaagcttcttgcgttgaaagaaggtttactggt 803
||| ||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 113 atcgagtgaagaagcaattgaaactgctaaacttcttgccttgaaagaaggtttgctggt 54
Query: 804 tggtatatcttctggagctgcagcagcagctgcaatta 841
|| ||||||||||| ||||| ||||| || |||||||
Sbjct: 53 agggatatcttctggtgctgctgcagccgccgcaatta 16
>KJC_c04629
Length = 511
Score = 117 bits (59), Expect = 5e-26
Identities = 304/383 (79%), Gaps = 2/383 (0%)
Strand = Plus / Plus
Query: 475 cattatgaaaccactggaccagaaatatggagagactcaagagggaaagttgatgccctg 534
|||||||| || ||||||||||||||||||| || ||| |||| ||||||||||| ||
Sbjct: 5 cattatgagactactggaccagaaatatggaaaggatcaggaggaaaagttgatgctttg 64
Query: 535 gttgcagggattggaaccggtggaaccgtgactggagctgggaaattcctcaaggagaaa 594
|| |||||||||| || || |||||| | || || |||||||||| ||| || ||| |
Sbjct: 65 ttt-cagggattggtactgggggaaccataacaggtgctgggaaatacctaaaagagcag 123
Query: 595 aacacagagatcaaggtgtatggtgtagaaccggctgaaagtgcagtcttaaatggagga 654
|| | | || ||| |||||||||| ||||| | |||||| || || ||| |||||||
Sbjct: 124 aatcctaacattaagttgtatggtgtggaaccagttgaaagcgctgttttatctggagga 183
Query: 655 aatcctggtccacatctgatccagggtattggtgctggtataatccctagtgttttggat 714
|| |||||||| ||| |||||| || || |||||||| | ||||| | ||| ||||
Sbjct: 184 aaacctggtccgcataagatccaaggaataggtgctggcttcatcccaggagttctggaa 243
Query: 715 gttgacttgctagatgaagttcttcaagtatcaagtgaagaagctattgaaactgctaag 774
||||| | | ||||||||| |||||||||||||||| ||||| ||||||||||| |||
Sbjct: 244 gttgatatcattgatgaagttgttcaagtatcaagtgatgaagcaattgaaactgcaaag 303
Query: 775 cttcttgcgttgaaagaaggtttactggttggtatatcttctggagctgcagcagcagct 834
|||||||| | |||| |||||| || || || ||||||||||| ||||| | || |||
Sbjct: 304 cttcttgcactaaaag-aggtttgcttgtgggaatatcttctggtgctgccactgctgct 362
Query: 835 gcaattaagttggcaaagcggcc 857
||| ||||| | |||||| ||||
Sbjct: 363 gcagttaagcttgcaaagaggcc 385