Jatropha Genome Database
- JcCA0150621.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0150621.10 - phase: 1 /pseudo/partial
(923 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02434 482 e-136
KJC_c06912 220 5e-57
>KJC_c02434
Length = 1108
Score = 482 bits (243), Expect = e-136
Identities = 558/650 (85%), Gaps = 11/650 (1%)
Strand = Plus / Minus
Query: 1 gaaacagctaaagaagtgatgaaaatacaagatcccgttttcgcagaacgagagcgcttc 60
||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||
Sbjct: 1007 gaaacagctaaagaagtaatgaaaatacaagatcccgtttttgcagaacgac--cgcttg 950
Query: 61 tcgttgcagtagaaatagtgctttataaccgaaacgacatcatttttgggttgtacggag 120
|| |||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||
Sbjct: 949 tccttgcaggagaaatagtgctttataaccgaaatgacatcgtttttgggtcgtacggag 890
Query: 121 atcaatggaggcaaatgagaaaaatttgcacgttggaattacttagcgcaaaacgagtac 180
|||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 889 atcagtggaggcaaatgagaaaattttgcacgttggaattacttagcacaaaacgagtac 830
Query: 181 agtcctttcgatcagtgagagaagaagaagtcgcagatttagt-caaatttcttggttcg 239
|||| || ||| | ||||||||||||||||| ||| ||| || ||| || | || |
Sbjct: 829 agtcgttccgacccgtgagagaagaagaagttgcatcttttgtaaaaacttatgcgtaca 770
Query: 240 aaagagggaagtcctgttaatcttactcatactttattcgctttagcaaattctataatt 299
|| | |||| ||||||||||||||||||| ||||||| |||||| ||||||||||| ||
Sbjct: 769 aagaaaggaactcctgttaatcttactcatgctttatt-gctttaacaaattctatagtt 711
Query: 300 gcaagaaatacggttggtcataaaagcaaaaaccaagaagcatt-gctaagacttattga 358
||||||||| | ||||||||||||||||||||||||| ||| || | || | |||||||
Sbjct: 710 gcaagaaatgctgttggtcataaaagcaaaaaccaag-agcgttagttagaagttattga 652
Query: 359 tgatataattgaatcaataggaggtgttggtatagctgatatatttccttccttaaaatg 418
||| ||| ||| |||| | |||||||| |||||| |||||| ||||| ||| || ||||
Sbjct: 651 tgacatagttgtatcagga-gaggtgttagtatagttgatatctttcc-tccctacaatg 594
Query: 419 gcttccttcagtccaaagggaaaggtcttgaattaggaaattgcattatgaaacagatga 478
||||||| | | | | |||||||| || ||||| |||||||||| | | ||||||||
Sbjct: 593 gcttcctactgccaagagggaaagatcaagaatttggaaattgcaccaaaatacagatga 534
Query: 479 gatccttgaagatattttacaagagcatagagctaacaggcaggcagcggcttccaggaa 538
||| || |||||||| |||||||||||||||||||| || ||||| | ||||||| |||
Sbjct: 533 gattctcgaagatatcttacaagagcatagagctaa-agacaggcgacagcttccaagaa 475
Query: 539 tggcgatcagaggggagctgataatcttcttgatgttcttttggatcttcaacaaagcgg 598
| | ||| ||| | |||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 474 ttgggataggagcgaagctgataatcttcttgatg-tcttttggatcttcaacagagcgg 416
Query: 599 aaatcttgatgttcctttaactgatgtcgccatcaaagcagcaatcattg 648
||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 415 aaatcttgatg-tcctttaactgatgtcgccatcaaagcagcaattattg 367
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 648 gctgagaaattcaaaccggagagatttattgatag 682
||||||| |||||| ||||||||||||||||||||
Sbjct: 37 gctgagagattcaagccggagagatttattgatag 3
>KJC_c06912
Length = 550
Score = 220 bits (111), Expect = 5e-57
Identities = 228/267 (85%)
Strand = Plus / Plus
Query: 649 ctgagaaattcaaaccggagagatttattgatagtgcaattgattataggggtaccaatt 708
||||||||||||| ||||||||||||||||||||| |||| |||||| ||||| |||
Sbjct: 211 ctgagaaattcaatccggagagatttattgatagttcaatcgattatttgggtaatcatt 270
Query: 709 ttgaactaattccatttggagcaggaaaaagaatatgccctggaatgactctaggtatgg 768
||||| |||||||||| |||||||||||| ||||||||||||| | |||||||||
Sbjct: 271 ttgaatatcttccatttggtgcaggaaaaagagtatgccctggaattgcgttaggtatgg 330
Query: 769 ctaatctggagattttcctggcaaacttgctatatcattttgactggaaatttcctaaag 828
| || |||| | |||||| ||||| ||||| | ||||||||||||||||||||||||||
Sbjct: 331 ttcatatggaaaatttccttgcaaatttgctctttcattttgactggaaatttcctaaag 390
Query: 829 gagtaactgcagaaaatcttgacatgaacgaagtttttggaggagctgtcaaaagaaaag 888
|| |||||||||| ||||||||||||| ||| | ||||||||||| | | || |||||||
Sbjct: 391 gaataactgcagagaatcttgacatgaccgatgcttttggaggagttatgaagagaaaag 450
Query: 889 tagaccttgaattggttcccattccat 915
| ||||||||| || ||||||||||||
Sbjct: 451 ttgaccttgaactgattcccattccat 477