Jatropha Genome Database
- JcCA0150461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0150461.10 - phase: 0
(1497 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01163 311 3e-84
KJC_s19292 109 2e-23
>KJC_c01163
Length = 1184
Score = 311 bits (157), Expect = 3e-84
Identities = 701/881 (79%), Gaps = 1/881 (0%)
Strand = Plus / Minus
Query: 112 ccgaaggaagcagcatatcaagtgataaatgatgagctaatgttggatggaaatccaagg 171
|||||||||||||| ||||| | || || |||||||||||||||||||| |||||||||
Sbjct: 1036 ccgaaggaagcagcgtatcagatcatcaacgatgagctaatgttggatgggaatccaagg 977
Query: 172 ctaaatttggcttcctttgtgacgacatggatggagcctgagtgtaatgatctgatcatg 231
|| || |||| |||||||| || ||||||||||| ||||| ||| || | || || |||
Sbjct: 976 cttaacctggcctcctttgtaactacatggatggaacctgaatgtgataagcttattatg 917
Query: 232 gcttccattaacaaaaattatgttgacatggatgagtatcctgttaccaccgagctccag 291
||| || ||||| || || ||||||||||||||||| || || ||||| ||| | |||
Sbjct: 916 gctggtatcaacaagaactacgttgacatggatgagtacccggtcaccactgagttgcag 857
Query: 292 aatcggtgtgtgaatatgatagctcacttgtttcatgctccagctggggaggatgaaact 351
|| || ||||| || |||||||| || ||||| | || ||| ||| || || |||
Sbjct: 856 aaccgatgtgttaacatgatagcacatctgtttaacgccccacttggagattcagagact 797
Query: 352 gcagttggagtggggactgtgggatcatcagaggcaatcatgctgtctggattagcattt 411
|| ||||||||||| ||||| || || ||||||||||| ||| | |||||||||||||
Sbjct: 796 gcggttggagtgggaactgttgggtcttcagaggcaataatgttagctggattagcattc 737
Query: 412 aaaagaaagtggcagaacaagagaaaagcacaaggcaagccatacgataagcccaacata 471
|| || || |||||||||||||||||||| |||| ||||| | ||||||||| |||||
Sbjct: 736 aagaggaaatggcagaacaagagaaaagctgaaggaaagcccttcgataagcctaacatt 677
Query: 472 gtgactggagctaacgtgcaggtctgctgggagaaatttgcaaggtactttgaagttgaa 531
|| ||||| ||||| || ||||| || |||||||||||||| ||||| |||||||| ||
Sbjct: 676 gtcactggtgctaatgttcaggtttgttgggagaaatttgctaggtattttgaagtagag 617
Query: 532 ctaaaggaggtgaagctgactgaaggcaattatgtgatggaccccgtgaaagctgttgag 591
| ||||| |||||||| | || || ||||||||||||| || |||||| || ||
Sbjct: 616 ttgaaggaagtgaagcttagagatgggtattatgtgatggatccaaagaaagcagtggat 557
Query: 592 atggtggatgagaatacaatttgcgttgcagccattttgggatcaacacttactggggag 651
| || |||||||| |||||||| ||||| || || | || || || |||| ||||||
Sbjct: 556 ttagttgatgagaacacaatttgtgttgctgctatccttggctccactcttaatggggaa 497
Query: 652 ttcgaagatgtgaagcttcttaatgaacttctgatcaaaaagaatgaggagactggttgg 711
|| |||||||| ||||| | ||||| || ||| | ||||| || | ||||| |||
Sbjct: 496 tttgaagatgtaaagctcttgaatgatctcttgacagagaagaacaagcaaactggatgg 437
Query: 712 gacacccccattcacgtggatgcagccagtggagggtttattgctccattcctttaccca 771
|| |||| ||||| ||||||||||| ||||| || |||||||| ||||| | || |||
Sbjct: 436 gataccca-attcatgtggatgcagcaagtggtggatttattgcaccatttttgtatcca 378
Query: 772 gatcttgaatgggattttcgtctgccattggtgaagagcattaatgtcagcggtcacaag 831
|| ||||| ||||||||| | || ||||| || ||||| || ||||| || |||||||||
Sbjct: 377 gaacttgagtgggattttagactaccattagttaagagtatcaatgttagtggtcacaag 318
Query: 832 tatggcctcgtttatgctggtgttggttgggctgtttggaggactaaggaagacttgcca 891
||||| || || ||||||||||||||||||| ||||||||| || || ||||||||
Sbjct: 317 tatggacttgtgtatgctggtgttggttgggtaatttggaggagcaaagaggacttgcct 258
Query: 892 gaggagcttatctttcacattaactaccttggctctgatcaacccactttcacactcaac 951
|| || ||||||||||| || || |||||||| |||||||||| || || || |||||
Sbjct: 257 gaagaacttatctttcatatcaattaccttggagctgatcaacctacctttaccctcaat 198
Query: 952 ttctcaaaaggctctagtcaaataattgcacaatattatca 992
||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 197 ttctccaaaggttctagtcaaattattgctcaatactatca 157
>KJC_s19292
Length = 320
Score = 109 bits (55), Expect = 2e-23
Identities = 127/151 (84%)
Strand = Plus / Plus
Query: 398 ctggattagcatttaaaagaaagtggcagaacaagagaaaagcacaaggcaagccatacg 457
||||||||||||| || || || |||||||||||||||||||| |||| ||||| | ||
Sbjct: 74 ctggattagcattcaagaggaaatggcagaacaagagaaaagctgaaggaaagcccttcg 133
Query: 458 ataagcccaacatagtgactggagctaacgtgcaggtctgctgggagaaatttgcaaggt 517
||||||| ||||| || ||||| ||||| || ||||| || |||||||||||||| ||||
Sbjct: 134 ataagcctaacattgtcactggtgctaatgttcaggtttgttgggagaaatttgctaggt 193
Query: 518 actttgaagttgaactaaaggaggtgaagct 548
| |||||||| || | ||||| ||||||||
Sbjct: 194 attttgaagtagagttgaaggaagtgaagct 224