Jatropha Genome Database

JcCA0149501.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0149501.20 - phase: 0 /partial
         (318 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c11812                                                            347   1e-95

>KJC_c11812 
          Length = 890

 Score =  347 bits (175), Expect = 1e-95
 Identities = 182/183 (99%), Gaps = 1/183 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  aggaaagcatcatgcctgaagataaaaagaccaagttcctggaatccgaagattcggagt 100
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 709 aggaaagcatcatgcctgaagataaaa-gaccaagttcctggaatccgaagattcggagt 767

                                                                       
Query: 101 ttgaaaaagttatagacttctacttatgttctcagagtgatgtgttcgtaccagccatat 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ttgaaaaagttatagacttctacttatgttctcagagtgatgtgttcgtaccagccatat 827

                                                                       
Query: 161 ctggcctattctatgccaatgtagctggtaagagaatagcttctggtaagacacaaattc 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 ctggcctattctatgccaatgtagctggtaagagaatagcttctggtaagacacaaattc 887

              
Query: 221 ttg 223
           |||
Sbjct: 888 ttg 890