Jatropha Genome Database
- JcCA0149501.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0149501.10 - phase: 0 /pseudo/partial
(2500 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01027 505 e-142
KJC_c01453 54 2e-06
>KJC_c01027
Length = 2632
Score = 505 bits (255), Expect = e-142
Identities = 859/1055 (81%), Gaps = 4/1055 (0%)
Strand = Plus / Minus
Query: 461 atggctttacagaagctgatcttgatagagaattctttttaggggtatggaaaatgtctg 520
|||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 2622 atgggtttacagaagctgatcttgatcgagaattctttttaggggtgtggagaatgtctg 2563
Query: 521 ggttcttatcagataatcgcccagtaatgactctacgatctatattaacaagacttgaac 580
|||||||||| || || || ||||| ||| || | || ||||| || | ||||| |
Sbjct: 2562 ggttcttatctgaaaaccgtccagtgcagacccttaggtccatattgactcggcttgagc 2503
Query: 581 aagcatattgtggacatgttggatatgagtatatgcatatagatgatagtgctaaatgta 640
| || |||||||| |||| | |||||||||||| || | ||| | | ||||||||
Sbjct: 2502 aggcttattgtgggagcattggctttgagtatatgcacattgcagatcgggataaatgta 2443
Query: 641 attggttaagacacaagattgagacaccagtaccaatgacatacaatcaagatagacttg 700
| ||||| ||| |||||||||| || ||| || ||| ||||||| | | | ||
Sbjct: 2442 actggttgagagacaagattgaaaccccaactcctatgcagtacaatcgtcagcgtcgtg 2383
Query: 701 ag-ttattgcttgataggctaacatggagtacacaatttgagaactttttggctactaaa 759
|| ||||| ||||||||| | | |||||| ||||||||||||||||| |||||||| ||
Sbjct: 2382 aggttatt-cttgataggttgatatggagcacacaatttgagaacttcttggctacaaag 2324
Query: 760 atgaaagcagcaaagaggtttgggctagaaggtggggagactctgatacctggaatgaag 819
|| | ||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 2323 tggacaacagcaaagaggtttgggcttgaaggtggggaaactctgattcctggcatgaag 2264
Query: 820 gagatgtttgatagagcatctgatcttggtgtagagaacatagttgttggaatgcctcac 879
|||||||||||||| | | |||||||| || |||| ||||||| |||||||||||||
Sbjct: 2263 gagatgtttgataggtctgcagatcttggagttgagagcatagttattggaatgcctcat 2204
Query: 880 agaggaagattgaatgtactaggtaatgtttttcgtaaaccacttgcacagatatttagt 939
||||||||||| ||||| || ||||||||| |||| || || || ||| ||||||||
Sbjct: 2203 agaggaagattaaatgttcttggtaatgttgttcggaagcctctccgacaaatatttagc 2144
Query: 940 gaatttgacaagaatgcaaaggtaggcgatgagattggagtttacagtggtactggtgat 999
|||||| ||||| | ||||| |||| | |||| || |||||||||
Sbjct: 2143 gaatttagtggtggcacaaagcctgtagatgaagttggtctctacacaggaactggtgat 2084
Query: 1000 gttaaatatcacttgggaacttcttatgatagacctactagagctgggaagagaattcat 1059
|| || |||||||||||||||||||||||| | || || |||| ||| |||||||| |||
Sbjct: 2083 gtcaagtatcacttgggaacttcttatgatcgtccaaccagaggtggaaagagaatccat 2024
Query: 1060 ttgtcacttgttgcaaatcccagtcatttggaagctgttgatccacttgttcttggaaaa 1119
||||| | ||||||||||| ||||| ||||| ||||| |||||| ||||| |||||||
Sbjct: 2023 ttgtctttggttgcaaatcctagtcacttggaggctgtggatccagttgttgttggaaag 1964
Query: 1120 act-gagcaaagcaatattacacaaatgatctcgaccggactaaaaatatggctgttttg 1178
||| |||| |||||||||||| | | ||| ||| |||| |||||||||| ||| |
Sbjct: 1963 actagagctaagcaatattactcccaagatgcagacaggacaaaaaatatggaaattt-g 1905
Query: 1179 atccatggagatggtagctttgctgggcaaggtgtagtttatgaaaccttgcatcttagc 1238
|| ||||| |||||||||||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 1904 attcatggtgatggtagctttgcaggtcaaggtgtagtgtatgaaactctgcatcttagt 1845
Query: 1239 gcacttcctaattataccaccggtggaactatacacattgtagtgaataaccaagtagct 1298
||||| || || || || || ||||| |||||||||||||| |||||||||||||| |||
Sbjct: 1844 gcactgccaaactacactactggtgggactatacacattgtggtgaataaccaagttgct 1785
Query: 1299 ttcactacggatccaaggtcagggagatcttcacaatattgcactgatgctgctaaggca 1358
||||| || ||||||||| |||| |||||||| || ||||||||||||| ||| |||||
Sbjct: 1784 ttcacaactgatccaagggcaggcagatcttctcagtattgcactgatgttgcaaaggct 1725
Query: 1359 ttgaatgcccctatttttcatgtaaatggagatgatatggaggcagtagctcatgtgtgt 1418
||||||||||| ||||| |||||||||||||||||| |||||||||| | ||||| |||
Sbjct: 1724 ttgaatgccccaattttccatgtaaatggagatgatgtggaggcagttgttcatgcctgt 1665
Query: 1419 gagcttgcagcagaatggcgccagagtttccattctgacgttgtggttgatataatttgc 1478
||||| ||||| ||||||||||||| ||||||||| || |||||||||||| | ||||
Sbjct: 1664 gagctggcagctgaatggcgccagactttccattcggatgttgtggttgatttggtttgt 1605
Query: 1479 tatcgtagatttgggcataatgaggttgatgagcc 1513
|||||| ||||||||||||||||| ||||||||||
Sbjct: 1604 tatcgtcgatttgggcataatgagattgatgagcc 1570
Score = 381 bits (192), Expect = e-105
Identities = 672/828 (81%), Gaps = 3/828 (0%)
Strand = Plus / Minus
Query: 1651 agcaaagattatgtttctaaaagaagtgactggctttcatctcattgggctggtttcaag 1710
|||||||||||||| |||||||||| || ||||||||||||||||||||||| || |||
Sbjct: 1411 agcaaagattatgtccctaaaagaagagattggctttcatctcattgggctgggtttaag 1352
Query: 1711 tctcctgaacagctttcacgcatccgaaacactggggtaaaaccagatattttgaaggaa 1770
|||||||| ||||| ||||| |||| ||||||||||| ||||| || || | |||| |
Sbjct: 1351 tctcctgagcagctgtcacgtgtccgcaacactggggtgaaacctgagatct-gaagaat 1293
Query: 1771 gttggtaaagcaataacattccttccagatgatctaaagcctcaca-agcaagtgaaaaa 1829
||||| |||||||| ||| |||||||| || | |||||||||| ||| || |||||
Sbjct: 1292 gttggcaaagcaatcacaactcttccagagaatttcaagcctcacagagct-gtaaaaaa 1234
Query: 1830 gatatatagtgatagggctcaaatgattgagacaggagagggcattgattgggcacttgc 1889
| | ||| || | || ||||||||||| ||||| || || ||||| |||||| ||||
Sbjct: 1233 ggtttatgaacatcgtgcacaaatgattgaaacaggggaaggaattgactgggcagttgc 1174
Query: 1890 tgaagcactagcttttggaacattgctacttgagggtaaccatgtaagactgagtgggca 1949
||||| || ||||||| || || || | || ||||| ||||| ||| ||||||| ||
Sbjct: 1173 agaagcccttgcttttgctactttacttgtagaaggtaatcatgttagattgagtggtca 1114
Query: 1950 ggacgttgaaaggggtacgttcagtcatcgacatgctatggttcatgatcaggagtcagg 2009
||| |||||||| ||||| || |||||||| ||| || | ||||||||||| || ||
Sbjct: 1113 ggatgttgaaagaggtacatttagtcatcggcattctgtagttcatgatcaagaaaacgg 1054
Query: 2010 gaagaagtattgccctcttgaccatgtaatggtagaccaggatgaggaaatgtttactgt 2069
| |||||||||||||||| |||||||| | | |||| |||||||| |||||||||||
Sbjct: 1053 ggagaagtattgccctctggaccatgttgttatgaaccaagatgaggagatgtttactgt 994
Query: 2070 aagcaacagctccctttcagagttcggtgtacttggatttgaattgggttattcaatgga 2129
|||||||| || ||||||||||| ||||| || || |||||||||||||| ||||||||
Sbjct: 993 cagcaacagttctctttcagagtttggtgttctaggttttgaattgggttactcaatgga 934
Query: 2130 aaatccaaatgctttggttatgtgggaagctcaatttggtgacttttctaatggggctca 2189
|| ||| ||| | || || || |||||||||||||||||||||||| |||||||||| ||
Sbjct: 933 aagtcccaattcattagtaatctgggaagctcaatttggtgactttgctaatggggccca 874
Query: 2190 agtgatgtttgatcagtttttgagtggtggagaatcaaagtggctacgtcaaagtgggct 2249
|||||| ||||| ||||| |||| |||| |||||||| ||| | ||||||| ||||||
Sbjct: 873 agtgatatttgaccagttcctgagcagtggtgaatcaaaatggttgcgtcaaactgggct 814
Query: 2250 tgtcgtgctgcttcctcatggttatgatggccaaggccctgaacattcgagtgcacgatt 2309
|| ||||| ||||||||||| ||||| || || || ||||||||||| |||||||| ||
Sbjct: 813 agttgtgcttcttcctcatggatatgacggtcagggtcctgaacattcaagtgcacggtt 754
Query: 2310 ggagcgtttccttcagatgaatgatagcaacccctatgtggtgcctgagatggattcatt 2369
||| || ||||||||||||| |||| || || ||||| | ||||| ||||| ||
Sbjct: 753 ggaacgcttccttcagatgagtgatgataatccttatgttattcctgaaatggacccaac 694
Query: 2370 agtgagaaagcaaatccaggaatgcaattggcaggttgtgaatgttacaactcctgctaa 2429
| | || ||||| |||||||| || ||||||||||||||||| ||||| ||||||||
Sbjct: 693 tctccggaaacaaattcaggaatgtaactggcaggttgtgaatgtcacaacccctgctaa 634
Query: 2430 ttactttcatgtattgaggcgtcaggtacacagggagttccgtaagcc 2477
|||||| ||||| ||| |||| ||| ||||||| || |||||||||||
Sbjct: 633 ttacttccatgtcttgcggcgccagatacacagagatttccgtaagcc 586
>KJC_c01453
Length = 558
Score = 54.0 bits (27), Expect = 2e-06
Identities = 85/103 (82%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 173 ctgataacttcttagatgcaacaagtagtgtttacttggaagagttgcaaaaagcctggg 232
|||||| ||||||||||| ||| || |||||| ||||||| ||| | || | ||| ||||
Sbjct: 377 ctgatagcttcttagatggaaccagcagtgtt-acttggaggagctacagagagcttggg 435
Query: 233 aagtggatcccaataatgtagatgagtcttgggacaatttctt 275
||| || || |||| ||| |||||||| ||||||||||||||
Sbjct: 436 aagctgacccaaatagtgtggatgagtcatgggacaatttctt 478