Jatropha Genome Database

JcCA0149441.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0149441.20 - phase: 0 /partial
         (243 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09340                                                            468   e-132

>KJC_c09340 
          Length = 737

 Score =  468 bits (236), Expect = e-132
 Identities = 243/244 (99%), Gaps = 1/244 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatgatgctgctattctccatacatcctttgctaggcttctgggtcatcccaaagcttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tatgatgctgctattctccatacatcctttgctaggcttctgggtcatcccaaagcttca 535

                                                                       
Query: 61  cacttggaggcttcaaatgaactccagtttt-tccacgaactagttgctcgtctaaacaa 119
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 536 cacttggaggcttcaaatgaactccagttttttccacgaactagttgctcgtctaaacaa 595

                                                                       
Query: 120 tagaataaagggatctgaggcagttatttcagagctctggtatgtggaggaatatgatgt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tagaataaagggatctgaggcagttatttcagagctctggtatgtggaggaatatgatgt 655

                                                                       
Query: 180 actggctcttgcattgaatggaagaatgaacatccgcaagttccaacttggctgcaaaac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 actggctcttgcattgaatggaagaatgaacatccgcaagttccaacttggctgcaaaac 715

               
Query: 240 aact 243
           ||||
Sbjct: 716 aact 719