Jatropha Genome Database

JcCA0149441.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0149441.10 - phase: 0 /pseudo/partial
         (945 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c11502                                                           1015   0.0  

>KJC_c11502 
          Length = 616

 Score = 1015 bits (512), Expect = 0.0
 Identities = 519/520 (99%), Gaps = 1/520 (0%)
 Strand = Plus / Plus

                                                                       
Query: 225 ggtgagtttctgcattggttgattcaattcgtcggaacaaacatgagttctgagactcct 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  ggtgagtttctgcattggttgattcaattcgtcggaacaaacatgagttctgagactcct 157

                                                                       
Query: 285 tctttggcggctgatgaggtcaatgtaacagcagaggctaatgaaaacgggctgttgtca 344
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 158 tctttggcggctgatgaggtcaatgtaacagcagaggctaatgaaaacgg-ctgttgtca 216

                                                                       
Query: 345 tggcaaaagtaaagggaaagtaccaaaaggaattcacaaggctgagagggaaaaactgaa 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tggcaaaagtaaagggaaagtaccaaaaggaattcacaaggctgagagggaaaaactgaa 276

                                                                       
Query: 405 gcgcgagcaattgaatgagctcttcttggagctagccagtgctcttgaactgactcagcc 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gcgcgagcaattgaatgagctcttcttggagctagccagtgctcttgaactgactcagcc 336

                                                                       
Query: 465 aaataatggaaaggcctcaattttgtctgaagcgactaaattgttgaaggattttcttgt 524
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aaataatggaaaggcctcaattttgtctgaagcgactaaattgttgaaggattttcttgt 396

                                                                       
Query: 525 ccagattgagtgcctcaaaaaggagaatgcatctctgttatctgaatctcactatgtaac 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ccagattgagtgcctcaaaaaggagaatgcatctctgttatctgaatctcactatgtaac 456

                                                                       
Query: 585 tacagagaagaatgagctgaaagaagaaaactcagtactacaaactcagattgaaggact 644
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tacagagaagaatgagctgaaagaagaaaactcagtactacaaactcagattgaaggact 516

                                                                       
Query: 645 tcaaagtgagctggaagcaaggatggtccaatcaaaacctgatctgaatgcccctcctcc 704
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tcaaagtgagctggaagcaaggatggtccaatcaaaacctgatctgaatgcccctcctcc 576

                                                   
Query: 705 cgagtttgagcagcctgaattgacatcacattttccagga 744
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 cgagtttgagcagcctgaattgacatcacattttccagga 616