Jatropha Genome Database
- JcCA0149021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0149021.10 - phase: 0
(762 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00602 1511 0.0
KJC_s19296 595 e-170
>KJC_c00602
Length = 925
Score = 1511 bits (762), Expect = 0.0
Identities = 762/762 (100%)
Strand = Plus / Minus
Query: 1 atgtgcggaggtgctattatttcagatttcgtcgccgtgaaacgtagccggcgattgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 atgtgcggaggtgctattatttcagatttcgtcgccgtgaaacgtagccggcgattgaac 866
Query: 61 gccgaggatctctggtctgagcttgacactttctctgactttcttggcttggattatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gccgaggatctctggtctgagcttgacactttctctgactttcttggcttggattatcct 806
Query: 121 aataatggcaataaagaagtcctgccttcccactttgatcttgaactccctcaaaagccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aataatggcaataaagaagtcctgccttcccactttgatcttgaactccctcaaaagccg 746
Query: 181 aaccagctcaacgaagtggagaagataacagagaaggcaagtcatagtcaaggcgatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaccagctcaacgaagtggagaagataacagagaaggcaagtcatagtcaaggcgatgta 686
Query: 241 aaggaagggaacaagaccaagagaactcgaaagaatatttacaggggaataaggcgaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaggaagggaacaagaccaagagaactcgaaagaatatttacaggggaataaggcgaagg 626
Query: 301 ccatggggaaaatgggcggctgaaatcagagacccgcacaagggcgtacgtgtttggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccatggggaaaatgggcggctgaaatcagagacccgcacaagggcgtacgtgtttggctt 566
Query: 361 ggtacttacaacacagctgaagaagccgctcgagcctacgatgaagctgccaagcgtatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtacttacaacacagctgaagaagccgctcgagcctacgatgaagctgccaagcgtatc 506
Query: 421 cgtggtgaaaaagccaagcttaattttggccagtcacccccattagccccagctctggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cgtggtgaaaaagccaagcttaattttggccagtcacccccattagccccagctctggta 446
Query: 481 cctccatacaagaagcgttgcttgatcaatcctggcatggccactgctagctaccaaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctccatacaagaagcgttgcttgatcaatcctggcatggccactgctagctaccaaatg 386
Query: 541 accgcgccaccgccagaaccgtacgcgagtctcggttaccaaaaagaaatggctagtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 accgcgccaccgccagaaccgtacgcgagtctcggttaccaaaaagaaatggctagtgat 326
Query: 601 tataagctgaaagagcaaatatcgagcctggaaatgtttctcggtttggagcctgaagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tataagctgaaagagcaaatatcgagcctggaaatgtttctcggtttggagcctgaagag 266
Query: 661 atggcagctcagctgagttgtgaggggtttaactcggtggacctatggatgctgggtgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggcagctcagctgagttgtgaggggtttaactcggtggacctatggatgctgggtgac 206
Query: 721 ctcgtcagccaccatcagaatcatggcctactcccctattaa 762
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcgtcagccaccatcagaatcatggcctactcccctattaa 164
>KJC_s19296
Length = 553
Score = 595 bits (300), Expect = e-170
Identities = 317/320 (99%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 195 agtggagaagataacagagaaggcaagtcatagtcaaggcgatgtaaaggaagggaacaa 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agtggagaagataacagagaaggcaagtcatagtcaaggcgatgtaaaggaagggaacaa 294
Query: 255 gaccaagagaactcgaaagaatatttacaggggaataaggcgaa-ggccatggggaaaat 313
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 295 gaccaagagaactcgaaagaatatttacaggggaataaggcgaaaggccatggggaaaat 354
Query: 314 gggcggctgaaatcagagacccgcacaagggcgtacgtgtttggcttggtacttacaaca 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gggcggctgaaatcagagacccgcacaagggcgtacgtgtttggcttggtacttacaaca 414
Query: 374 cagctgaagaagccgctcgagcctacgatgaagctgccaagcgtatccgtggtgaaaaag 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cagctgaagaagccgctcgagcctacgatgaagctgccaagcgtatccgtggtgaaaaag 474
Query: 434 ccaagcttaattttggccagtcacccccattagccccagctctggtacctccatacaaga 493
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 475 ccaagcttaa-tttggccagtcacccccattagccccagctccggtacctccatacaaga 533
Query: 494 agcgttgcttgatcaatcct 513
||||||||||||||||||||
Sbjct: 534 agcgttgcttgatcaatcct 553
Score = 276 bits (139), Expect = 7e-74
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 58 aacgccgaggatctctggtctgagcttgacactttctctgactttcttggcttggattat 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacgccgaggatctctggtctgagcttgacactttctctgactttcttggcttggattat 60
Query: 118 cctaataatggcaataaagaagtcctgccttcccactttgatcttgaactccctcaaaag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctaataatggcaataaagaagtcctgccttcccactttgatcttgaactccctcaaaag 120
Query: 178 ccgaaccagctcaacgaag 196
|||||||||||||||||||
Sbjct: 121 ccgaaccagctcaacgaag 139