Jatropha Genome Database
- JcCA0148631.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0148631.10 - phase: 0 /partial
(723 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04043 1066 0.0
KJC_c01931 438 e-123
>KJC_c04043
Length = 686
Score = 1066 bits (538), Expect = 0.0
Identities = 566/570 (99%), Gaps = 4/570 (0%)
Strand = Plus / Plus
Query: 1 atggctcttaatttgctttctccggctgaaatcaaagccatttccttcttagattccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggctcttaatttgctttctccggctgaaatcaaagccatttccttcttagattccacc 180
Query: 61 aagtccaaccagctacccaagcttccaggtagtttcagtttgaagagaaaggatttggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtccaaccagctacccaagcttccaggtagtttcagtttgaagagaaaggatttggga 240
Query: 121 aggaaagtgcaatgttcggctcagcctcctccaccagcctggcctgggagagcttttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggaaagtgcaatgttcggctcagcctcctccaccagcctggcctgggagagcttttcca 300
Query: 181 gagccaggccgtaagacttgggatggtccgaagcctatttcaattgttggatccactggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagccaggccgtaagacttgggatggtccgaagcctatttcaattgttggatccactggc 360
Query: 241 tcaattggtactcagacattggatatagtggcagagaatcctaataaatttaaagtggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcaattggtactcagacattggatatagtggcagagaatcctaataaatttaaagtggtg 420
Query: 301 gcgcttgcggctggttcaaatgttactcttcttgctgatcaggtgaaaactttcaaaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgcttgcggctggttcaaatgttactcttcttgctgatcaggtgaaaactttcaaaccg 480
Query: 361 caacttgttgcagttaggaatgagtcattagttgatgagctcaaagaggctttagctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caacttgttgcagttaggaatgagtcattagttgatgagctcaaagaggctttagctgat 540
Query: 421 gttgaagaaaagcctgagattattcctggggagcagggaattgttgaggttgctcgccat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 541 gttgaagaaaagcctgagattattcctggggagcagggaattgttgaggttgctcg-cat 599
Query: 481 ccagatgctgtcagtgttgttacgggaatagtaggttgtgcaggcttaaagcctaccgtg 540
|||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 600 ccagatgctgtcagtg-tgttac-ggaatagta-gttgtgcaggcttaaagcctaccgtg 656
Query: 541 gctgcaatagaagctggaaaagacatatgc 570
||||||||||||||||||||||||||||||
Sbjct: 657 gctgcaatagaagctggaaaagacatatgc 686
>KJC_c01931
Length = 1050
Score = 438 bits (221), Expect = e-123
Identities = 228/229 (99%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 495 tgttgttacgggaatagtaggttgtgcaggcttaaagcctaccgtggctgcaatagaagc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttgttacgggaatagtaggttgtgcaggcttaaagcctaccgtggctgcaatagaagc 60
Query: 555 tggaaaagacatatgcttggccaataaagagactttaattgctggaggtccttttgtcct 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaaaagacatatgcttggccaataaagagactttaattgctggaggtccttttgtcct 120
Query: 615 acctcttgctcacaaatataacgtaaaaattcttccagctgattcagaacattctgctat 674
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 a-ctcttgctcacaaatataacgtaaaaattcttccagctgattcagaacattctgctat 179
Query: 675 atttcagtgtattcagggcctacctgaaggtgcattgcggcgcattatt 723
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atttcagtgtattcagggcctacctgaaggtgcattgcggcgcattatt 228