Jatropha Genome Database
- JcCA0147561.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0147561.20 - phase: 0
(612 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04366 1164 0.0
>KJC_c04366
Length = 822
Score = 1164 bits (587), Expect = 0.0
Identities = 604/612 (98%)
Strand = Plus / Plus
Query: 1 atggctctgaaccctcaactgtttcaaaatggcttgccggtcccatttactaatgagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atggctctgaaccctcaactgtttcaaaatggcttgccggtcccatttactaatgagatc 63
Query: 61 tttgttttgagtagagatggcgtcgagttcgagattgataagatccctggaagtcatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tttgttttgagtagagatggcgtcgagttcgagattgataagatccctggaagtcatgga 123
Query: 121 ggccacgtcaaagctaagggagtaatctatttgtctaatgtacgactggtttttgtcgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggccacgtcaaagctaagggagtaatctatttgtctaatgtacgactggtttttgtcgca 183
Query: 181 cataaacctgttggagcctttactgcttttgatatgcctctgctttatattcatggagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cataaacctgttggagcctttactgcttttgatatgcctctgctttatattcatggagaa 243
Query: 241 aaattcaaccaaccaatattcttttgcaacaatatttctggtcttgtggagccagtagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaattcaaccaaccaatattcttttgcaacaatatttctggtcttgtggagccagtagtc 303
Query: 301 ccagaaaatgagaatggtgctctctactccactcactcattcaagattttgttcaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccagaaaatgagaatggtgctctctactccactcactcattcaagattttgttcaaggaa 363
Query: 361 gggggttgtggaaccttcattccaannnnnnncaacttgatctcttcagtgagacaaaat 420
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 364 gggggttgtggaaccttcattccaattttttctaacttgatctcttcagtgagacaaaat 423
Query: 421 aatcaacctacacctggaatggggcctcagatggatcctttacgagcagctcagactcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aatcaacctacacctggaatggggcctcagatggatcctttacgagcagctcagactcca 483
Query: 481 gttgatgaaatgatgagacatgcatatgttgatcctaatgatccaacaagaatattctta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gttgatgaaatgatgagacatgcatatgttgatcctaatgatccaacaagaatattctta 543
Query: 541 cagcagcccaccccagaatctgagttgagaaggcgcacataccagttgtctccagttgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cagcagcccaccccagaatctgagttgagaaggcgcacataccagttgtctccagttgaa 603
Query: 601 cgctccatgtga 612
||||||||||||
Sbjct: 604 cgctccatgtga 615