Jatropha Genome Database

JcCA0147251.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0147251.30 - phase: 0 /TE/partial
         (252 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06895                                                            392   e-109

>KJC_c06895 
          Length = 844

 Score =  392 bits (198), Expect = e-109
 Identities = 222/230 (96%)
 Strand = Plus / Minus

                                                                       
Query: 23  gcaggattgatgaagaacagacaccagaagatgctgaagatggtcctccagaactgcttt 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcaggattgatgaagaacagacaccagaagatgctgaagatggtcctccagaactgcttt 307

                                                                       
Query: 83  ttattcatggtggccacacaagtaaaatatcagatttttcatggaatccctgtgaagact 142
           ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct: 306 ttattcatggtggtcacacaagtaaaatatcagaattttcgtggaatccttgtgaagact 247

                                                                       
Query: 143 gggttattgcaagtgtggccgaagataatatccttcagatatggcaaatggaagagaata 202
           ||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||
Sbjct: 246 gggttattgcaagtgtggctgaagataacatccttcagatatggcaaatggcagagaata 187

                                                             
Query: 203 tctaccatgatgaagatgacatgcctggggatgaatccacaaaaggttcc 252
           ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tctaccacgatgaagatgacatgcctggggatgaatccacaaaaggttcc 137