Jatropha Genome Database
- JcCA0146401.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146401.10 - phase: 0
(621 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00175 1152 0.0
KJC_c00103 402 e-112
KJC_s14857 119 8e-27
KJC_s19756 101 2e-21
>KJC_c00175
Length = 926
Score = 1152 bits (581), Expect = 0.0
Identities = 611/622 (98%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 1 atggtatcgctaaaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 atggtatcgctaaaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggc 89
Query: 61 aaggtctggctcgatcctaatgaggtcaatgaaatttccatggccaattccaggcagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aaggtctggctcgatcctaatgaggtcaatgaaatttccatggccaattccaggcagaac 149
Query: 121 gttagaaagctagtgaaggatggtttcatcattaggaagccaacaaagattcactctcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gttagaaagctagtgaaggatggtttcatcattaggaagccaacaaagattcactctcgt 209
Query: 181 tctcgtgcacgcagaatgaaggaggccaagagaaagggtcgtcactctggatatggtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tctcgtgcacgcagaatgaaggaggccaagagaaagggtcgtcactctggatatggtaag 269
Query: 241 cgcaagggtaccagggaggctaggctgccaaccaagatcctttggatgaggagaatgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cgcaagggtaccagggaggctaggctgccaaccaagatcctttggatgaggagaatgcgt 329
Query: 301 gtcctgaggcgtctgctgcgcaaatacagggaatccnnnnnnnttgacaagcacatgtat 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 330 gtcctgaggcgtctgctgcgcaaatacagggaatccaaaaaaattgacaagcacatgtat 389
Query: 361 catgacatgtacatgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catgacatgtacatgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaa 449
Query: 421 agtatccataaatcaaaggctgaaaaggcaagagagaagactttatctgaccaatttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agtatccataaatcaaaggctgaaaaggcaagagagaagactttatctgaccaatttgag 509
Query: 481 gctaagcgtgcaaagaacaaggcaagca-gggagaggaagatagccagaagagaggagcg 539
|||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||
Sbjct: 510 gctaagcgtgcaaagaacaaggcacacaggggataggaagatagccagaagagaggagcg 569
Query: 540 tttggctcaggggcctggagagaaggcaccacaagcacctgccccacagcagaccgaggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tttggctcaggggcctggagagaaggcaccacaagcacctgccccacagcagaccgaggg 629
Query: 600 agcaaagaaatccaagaagtga 621
||||||||||||||||||||||
Sbjct: 630 agcaaagaaatccaagaagtga 651
>KJC_c00103
Length = 1015
Score = 402 bits (203), Expect = e-112
Identities = 427/504 (84%)
Strand = Plus / Plus
Query: 1 atggtatcgctaaaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggc 60
||||| ||||| || || || |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 103 atggtttcgctgaagctccaaaagcggcttgccgcgagcgttctcaagtgtgggaaaggg 162
Query: 61 aaggtctggctcgatcctaatgaggtcaatgaaatttccatggccaattccaggcagaac 120
||||| ||||||||||| ||||| ||||| ||||| ||||||||||| || | || |||
Sbjct: 163 aaggtatggctcgatcccaatgaagtcaacgaaatctccatggccaactctcgccaaaac 222
Query: 121 gttagaaagctagtgaaggatggtttcatcattaggaagccaacaaagattcactctcgt 180
| || ||| |||| ||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 223 ataaggaagttagttaaggatggtttcatcatcaggaagccaacaaagatccactcccga 282
Query: 181 tctcgtgcacgcagaatgaaggaggccaagagaaagggtcgtcactctggatatggtaag 240
||||| ||||| |||||||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 283 tctcgggcacgtcgaatgaaggaagccaaaagaaaagggcgacactctggatatggtaag 342
Query: 241 cgcaagggtaccagggaggctaggctgccaaccaagatcctttggatgaggagaatgcgt 300
||||||||||| || ||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 343 cgcaagggtacaagagaggctaggctgccaacaaagattctctggatgagaaggatgcgt 402
Query: 301 gtcctgaggcgtctgctgcgcaaatacagggaatccnnnnnnnttgacaagcacatgtat 360
|| || ||||||||||| ||||| || || ||||| ||||||||||||||||
Sbjct: 403 gttctcaggcgtctgctccgcaagtatagagaatcaaagaagattgacaagcacatgtac 462
Query: 361 catgacatgtacatgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaa 420
|||||||||||||||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 463 catgacatgtacatgaaggtgaagggtaatgtctttaagaacaagcgtgttcttatggaa 522
Query: 421 agtatccataaatcaaaggctgaaaaggcaagagagaagactttatctgaccaatttgag 480
||||| || || ||||||||||| || || |||||||||||| | ||||| || ||||||
Sbjct: 523 agtattcacaagtcaaaggctgagaaagctagagagaagactctgtctgatcagtttgag 582
Query: 481 gctaagcgtgcaaagaacaaggca 504
|||||| | |||||||||||||||
Sbjct: 583 gctaagagggcaaagaacaaggca 606
>KJC_s14857
Length = 518
Score = 119 bits (60), Expect = 8e-27
Identities = 117/136 (86%)
Strand = Plus / Minus
Query: 383 agggtaatgtattcaagaataaacgtgtgctgatggaaagtatccataaatcaaaggctg 442
|||||||||| || ||||| || ||||| || ||||||||||| || || ||||||||||
Sbjct: 300 agggtaatgtctttaagaacaagcgtgttcttatggaaagtattcacaagtcaaaggctg 241
Query: 443 aaaaggcaagagagaagactttatctgaccaatttgaggctaagcgtgcaaagaacaagg 502
| || || |||||||||||| | ||||| || |||||||||||| | |||||||||||||
Sbjct: 240 agaaagctagagagaagactctgtctgatcagtttgaggctaagagggcaaagaacaagg 181
Query: 503 caagcagggagaggaa 518
|||||||||| |||||
Sbjct: 180 caagcagggaaaggaa 165
>KJC_s19756
Length = 382
Score = 101 bits (51), Expect = 2e-21
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 1 atggtatcgctaaaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggc 60
||||| ||||| || || || |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 2 atggtttcgctgaagctccaaaagcggcttgccgcgagcgttctcaagtgtgggaaaggg 61
Query: 61 aaggtctggctcgatcctaatgaggtcaatgaaatttccatggccaa 107
||||| ||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 62 aaggtatggctcgatcccaatgaagtcaacgaaatctccatggccaa 108