Jatropha Genome Database
- JcCA0146311.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146311.30 - phase: 0
(1395 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01204 1405 0.0
KJC_c03583 957 0.0
KJC_c06231 315 2e-85
KJC_c03564 159 2e-38
KJC_c00976 101 4e-21
KJC_c09914 90 2e-17
>KJC_c01204
Length = 825
Score = 1405 bits (709), Expect = 0.0
Identities = 716/717 (99%), Gaps = 1/717 (0%)
Strand = Plus / Plus
Query: 213 cagggaggcatcaaagcagatatatgcccttgaaaacattgaaggaatcgaagaatcaac 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 cagggaggcatcaaagcagatatatgcccttgaaaacattgaaggaatcgaagaatcaac 112
Query: 273 cactgaaaaagctgcagaaacatcccaaatgaaattggagaagaagtttgggcagtctcc 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cactgaaaaagctgcagaaacatcccaaatgaaattggagaagaagtttgggcagtctcc 172
Query: 333 agtgtttgtggcttccacgcttttagaaaatggtggagttcctcaagatgctagtcctgc 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 agtgtttgtggcttccacgcttttagaaaatggtggagttcctcaagatgctagtcctgc 232
Query: 393 atcacttttgagagaagccatccaggttatcagctgtggttatgaagataaaacggaatg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atcacttttgagagaagccatccaggttatcagctgtggttatgaagataaaacggaatg 292
Query: 453 gggaaaggaagttggctggatatatggctctgtgactgaggatatcctgacaggattcaa 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gggaaaggaagttggctggatatatggctctgtgactgaggatatcctgacaggattcaa 352
Query: 513 gatgcactgccatggatggcgatctgtgtactgcatacctaagcggcctgcgtttaaggg 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gatgcactgccatggatggcgatctgtgtactgcatacctaagcggcctgcgtttaaggg 412
Query: 573 gtcagctcctattaatctgtcagatcgtctacaccaagttcttcgatgggcccttgggtc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtcagctcctattaatctgtcagatcgtctacaccaagttcttcgatgggcccttgggtc 472
Query: 633 tgtggaaattttcttgagcagacattgtcctatttggtatggctatgggggtggattgaa 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgtggaaattttcttgagcagacattgtcctatttggtatggctatgggggtggattgaa 532
Query: 693 atggttggaacgattttcctacataaattcagtcgtgtatccttggacatccattccctt 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 atggttggaacgattttcctacataaattcagtcgtgtatccttggacatccattccctt 592
Query: 753 gcttgtttactgcactctaccagctatttgccttctcactgggaaattcattgttccaga 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gcttgtttactgcactctaccagctatttgccttctcactgggaaattcattgttccaga 652
Query: 813 gattagtaattatgccagcatcatattcatggctctcttcatatctattgctgctactgg 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gattagtaattatgccagcatcatattcatggctctcttcatatctattgctgctactgg 712
Query: 873 tgtccttgagatgcaatggggtggtgttggtatagacgactggtggagaaatgagca 929
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 713 tgtccttgagatgcaatggggt-gtgttggtatagacgactggtggagaaatgagca 768
>KJC_c03583
Length = 483
Score = 957 bits (483), Expect = 0.0
Identities = 483/483 (100%)
Strand = Plus / Minus
Query: 706 ttttcctacataaattcagtcgtgtatccttggacatccattcccttgcttgtttactgc 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttttcctacataaattcagtcgtgtatccttggacatccattcccttgcttgtttactgc 424
Query: 766 actctaccagctatttgccttctcactgggaaattcattgttccagagattagtaattat 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 actctaccagctatttgccttctcactgggaaattcattgttccagagattagtaattat 364
Query: 826 gccagcatcatattcatggctctcttcatatctattgctgctactggtgtccttgagatg 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gccagcatcatattcatggctctcttcatatctattgctgctactggtgtccttgagatg 304
Query: 886 caatggggtggtgttggtatagacgactggtggagaaatgagcagttttgggtgattgga 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caatggggtggtgttggtatagacgactggtggagaaatgagcagttttgggtgattgga 244
Query: 946 ggcgtttcatcacatctttttgctctcttccagggtttgctgaaggtgttggctggtgtc 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggcgtttcatcacatctttttgctctcttccagggtttgctgaaggtgttggctggtgtc 184
Query: 1006 aacacaaacttcactgtcacttcaaaagcagccgatgatggagcattttcagagctttat 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aacacaaacttcactgtcacttcaaaagcagccgatgatggagcattttcagagctttat 124
Query: 1066 atattcaaatggacatcactcttaatccctcccacaactttattgatcataaacatagtt 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atattcaaatggacatcactcttaatccctcccacaactttattgatcataaacatagtt 64
Query: 1126 ggagttgttgttggggtatcagatgctatcaacaatgggtatgattcatggggtccttta 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ggagttgttgttggggtatcagatgctatcaacaatgggtatgattcatggggtccttta 4
Query: 1186 ttt 1188
|||
Sbjct: 3 ttt 1
>KJC_c06231
Length = 457
Score = 315 bits (159), Expect = 2e-85
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 1 atgaaagggttagatggtttgcaaggacctatatatgttggaactgggtgtgttttccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atgaaagggttagatggtttgcaaggacctatatatgttggaactgggtgtgttttccga 341
Query: 61 agggtagcactttatggttatgatgcacctgtaaagaagaagccccctggcaagacctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agggtagcactttatggttatgatgcacctgtaaagaagaagccccctggcaagacctgc 401
Query: 121 aactgttggccaaaatggtgctgcatgtgctgtggatct 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aactgttggccaaaatggtgctgcatgtgctgtggatct 440
>KJC_c03564
Length = 947
Score = 159 bits (80), Expect = 2e-38
Identities = 227/276 (82%)
Strand = Plus / Minus
Query: 405 agaagccatccaggttatcagctgtggttatgaagataaaacggaatggggaaaggaagt 464
|||||||||||| ||||| |||||||| |||||||||||||| |||||||| || || ||
Sbjct: 369 agaagccatccatgttattagctgtggctatgaagataaaacagaatggggtaaagaggt 310
Query: 465 tggctggatatatggctctgtgactgaggatatcctgacaggattcaagatgcactgcca 524
||| ||||| ||||| || || || |||||||| ||||||| || || |||||||||||
Sbjct: 309 tggatggatttatggttcggttaccgaggatatattgacaggttttaaaatgcactgcca 250
Query: 525 tggatggcgatctgtgtactgcatacctaagcggcctgcgtttaaggggtcagctcctat 584
|||||||||||| | |||||||| ||| | ||||||| ||||| || || || || ||
Sbjct: 249 tggatggcgatcaatatactgcattcctgacaggcctgcatttaaaggttctgcgcccat 190
Query: 585 taatctgtcagatcgtctacaccaagttcttcgatgggcccttgggtctgtggaaatttt 644
||||| || ||||||||||| || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 189 caatctttccgatcgtctacatcaggtccttcggtgggctcttggatctgttgaaatatt 130
Query: 645 cttgagcagacattgtcctatttggtatggctatgg 680
|| ||||| || |||||| | |||||||| |||||
Sbjct: 129 tttaagcaggcactgtcctctgtggtatggttatgg 94
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1 atgaaagggttagatggtttgcaaggacctatatatgttggaactgggtgtgttttccga 60
|||||||| || ||||| | |||||||||||||||||||| ||||| ||||| ||| ||
Sbjct: 778 atgaaaggtttggatggcattcaaggacctatatatgttggcactggttgtgtgttcaga 719
Query: 61 agg 63
|||
Sbjct: 718 agg 716
>KJC_c00976
Length = 1696
Score = 101 bits (51), Expect = 4e-21
Identities = 222/279 (79%)
Strand = Plus / Minus
Query: 418 gttatcagctgtggttatgaagataaaacggaatggggaaaggaagttggctggatatat 477
|||||||||||||| ||||| || ||||| || ||||||| || |||| ||||| |||
Sbjct: 571 gttatcagctgtgggtatgaggacaaaacagattggggaagcgagattggatggatctat 512
Query: 478 ggctctgtgactgaggatatcctgacaggattcaagatgcactgccatggatggcgatct 537
|| ||||| || || ||||| || || ||||| |||||||| || ||| ||||| ||
Sbjct: 511 ggttctgttacagaagatattcttactggatttaagatgcatgcccgtggttggcggtca 452
Query: 538 gtgtactgcatacctaagcggcctgcgtttaaggggtcagctcctattaatctgtcagat 597
| |||||||| || ||||| || || ||||| ||||| ||||| |||||||| ||||||
Sbjct: 451 atttactgcatgcccaagcgtccagcttttaaagggtctgctcccattaatctttcagat 392
Query: 598 cgtctacaccaagttcttcgatgggcccttgggtctgtggaaattttcttgagcagacat 657
||| | ||||||| ||||||||||| | || || ||||||||| | || || | |||
Sbjct: 391 cgtttgaaccaagtgcttcgatgggctttgggttcagtggaaattcttttcagtcggcat 332
Query: 658 tgtcctatttggtatggctatgggggtggattgaaatgg 696
||||| ||||||||||| ||||| ||| || ||||||||
Sbjct: 331 tgtccaatttggtatggttatggtggtagactgaaatgg 293
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 913 tggtggagaaatgagcagttttgggtgattggaggcgtttcatcacatctttt 965
|||||||||||||| ||||||||||| || ||||| |||||| | ||||||||
Sbjct: 76 tggtggagaaatgaacagttttgggtcatcggaggagtttcagcccatctttt 24
>KJC_c09914
Length = 423
Score = 89.7 bits (45), Expect = 2e-17
Identities = 106/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 913 tggtggagaaatgagc-agttttgggtgattggaggcgtttcatcacatctttttgctct 971
||||||||||| |||| | ||||||||||||||||| || ||| ||||||| |||||| |
Sbjct: 262 tggtggagaaacgagcgaattttgggtgattggaggagtgtcagcacatctatttgctgt 203
Query: 972 cttccagggtttgctgaaggtgttggctggtgtcaacacaaacttcactgtcacttcaaa 1031
||||||||| || | ||||| |||||||||| | |||||||||||||| || |||||
Sbjct: 202 tttccagggtctgttaaaggttctggctggtgttgatacaaacttcactgtgacatcaaa 143
Query: 1032 agcag 1036
|||||
Sbjct: 142 agcag 138