Jatropha Genome Database
- JcCA0144291.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0144291.10 + phase: 2 /partial
(2491 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03564 145 6e-34
KJC_c01204 119 3e-26
KJC_c02030 100 3e-20
KJC_c03660 96 5e-19
KJC_c01682 92 8e-18
KJC_c00976 82 7e-15
KJC_c03583 74 2e-12
KJC_c12964 60 3e-08
KJC_c01756 60 3e-08
KJC_c09914 54 2e-06
KJC_c06231 52 7e-06
>KJC_c03564
Length = 947
Score = 145 bits (73), Expect = 6e-34
Identities = 220/269 (81%)
Strand = Plus / Minus
Query: 1508 gttattagctgcagctatgaagagaagactgaatggggaaaagagattggttggatatat 1567
||||||||||| |||||||||| || || |||||||| |||||| |||| ||||| |||
Sbjct: 356 gttattagctgtggctatgaagataaaacagaatggggtaaagaggttggatggatttat 297
Query: 1568 ggatcagtcactgaggatatcttaactggcttcaagatgcactgccgagggtggagatca 1627
|| || || || |||||||| || || || || || |||||||||| || ||| |||||
Sbjct: 296 ggttcggttaccgaggatatattgacaggttttaaaatgcactgccatggatggcgatca 237
Query: 1628 atctactgcatgcctctaagacctgcattcaaagggtctgcacccatcaatctttctgat 1687
|| |||||||| ||| || |||||||| ||||| ||||| |||||||||||||| |||
Sbjct: 236 atatactgcattcctgacaggcctgcatttaaaggttctgcgcccatcaatctttccgat 177
Query: 1688 cgattgcaccaggttctccgatgggcccttgggtctgtagaaattttcttgagcagacac 1747
|| | || ||||| || || ||||| ||||| ||||| ||||| || || ||||| |||
Sbjct: 176 cgtctacatcaggtccttcggtgggctcttggatctgttgaaatatttttaagcaggcac 117
Query: 1748 tgtcccctctggtatggttatggaggagg 1776
||||| || ||||||||||||||||||||
Sbjct: 116 tgtcctctgtggtatggttatggaggagg 88
Score = 63.9 bits (32), Expect = 2e-09
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 1055 gatcgatatgccaatagaaatgtggttttctttgacgttaacatgaaaggtcttgatggc 1114
||||||||||||||| | ||| | || |||||||| | |||||||||||| | ||||||
Sbjct: 820 gatcgatatgccaatcggaatattgtattctttgatataaacatgaaaggtttggatggc 761
Query: 1115 atccaaggaccagtatatgtgggaacaggttgtgttttca 1154
|| |||||||| ||||||| || || |||||||| ||||
Sbjct: 760 attcaaggacctatatatgttggcactggttgtgtgttca 721
>KJC_c01204
Length = 825
Score = 119 bits (60), Expect = 3e-26
Identities = 201/248 (81%)
Strand = Plus / Plus
Query: 1523 tatgaagagaagactgaatggggaaaagagattggttggatatatggatcagtcactgag 1582
|||||||| || || ||||||||||| || |||| ||||||||||| || || ||||||
Sbjct: 273 tatgaagataaaacggaatggggaaaggaagttggctggatatatggctctgtgactgag 332
Query: 1583 gatatcttaactggcttcaagatgcactgccgagggtggagatcaatctactgcatgcct 1642
|||||| | || || |||||||||||||||| || ||| |||| | |||||||| |||
Sbjct: 333 gatatcctgacaggattcaagatgcactgccatggatggcgatctgtgtactgcatacct 392
Query: 1643 ctaagacctgcattcaaagggtctgcacccatcaatctttctgatcgattgcaccaggtt 1702
| ||||| || || ||||| || || || ||||| || ||||| | ||||| |||
Sbjct: 393 aagcggcctgcgtttaaggggtcagctcctattaatctgtcagatcgtctacaccaagtt 452
Query: 1703 ctccgatgggcccttgggtctgtagaaattttcttgagcagacactgtcccctctggtat 1762
|| |||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||
Sbjct: 453 cttcgatgggcccttgggtctgtggaaattttcttgagcagacattgtcctatttggtat 512
Query: 1763 ggttatgg 1770
|| |||||
Sbjct: 513 ggctatgg 520
>KJC_c02030
Length = 1305
Score = 99.6 bits (50), Expect = 3e-20
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 320 agtactgttgatccattgaaagaacctccactgatcactgccaatacagtgctatccatt 379
||||||||||||||| |||||||||| |||||||||||||| || || || || || |||
Sbjct: 398 agtactgttgatccaatgaaagaacccccactgatcactgcaaacacggttctctcaatt 339
Query: 380 cttgctttggactatcctgtggataaagtctcctgctatgtatctgatgatggtgctgcc 439
||||| | || ||||| ||||| || || | |||||||| |||||||||||||| |||
Sbjct: 338 cttgcggttgattatccagtggacaaggttgcatgctatgtttctgatgatggtgcagcc 279
Query: 440 atgctttcatttga 453
|||||| |||||||
Sbjct: 278 atgcttacatttga 265
>KJC_c03660
Length = 1531
Score = 95.6 bits (48), Expect = 5e-19
Identities = 207/260 (79%)
Strand = Plus / Minus
Query: 338 aaagaacctccactgatcactgccaatacagtgctatccattcttgctttggactatcct 397
||||||||||| || | || ||||| ||||| |||||||||||||| | || || |||
Sbjct: 263 aaagaacctcctcttgttacagccaacacagttttatccattcttgctgttgattaccct 204
Query: 398 gtggataaagtctcctgctatgtatctgatgatggtgctgccatgctttcatttgaatcc 457
|| || ||||| ||||| ||||| |||||||||||| | || ||| | |||||||| ||
Sbjct: 203 gttgacaaagtatcctgttatgtttctgatgatggttcagcaatgttgacatttgaagcc 144
Query: 458 ttagcagaaacagcagagtttgcaaggaaatgggttccattctgcaaaaaatactcaatt 517
| | ||||| || |||||||||||||| ||||| || || ||||| ||| || |||
Sbjct: 143 ctttctgaaactgcggagtttgcaaggaagtgggtgcccttttgcaagaaacacaacatt 84
Query: 518 gaaccaagggctcccgagttttacttctcacagaagattgattatttaaaagataaagtg 577
||||| ||||| ||||||||||| || | || |||||||||||||| || ||||| |
Sbjct: 83 gaacctagggcacccgagttttattttgcccaaaagattgattatttgaaggataagata 24
Query: 578 cagccttcttttgtgaaaga 597
|| ||||||||||| |||||
Sbjct: 23 caaccttcttttgtaaaaga 4
>KJC_c01682
Length = 1341
Score = 91.7 bits (46), Expect = 8e-18
Identities = 199/246 (80%), Gaps = 3/246 (1%)
Strand = Plus / Minus
Query: 1523 tatgaagagaagactgaatggggaaaagagattggttggatatatggatcagtcactgag 1582
|||||||| ||||| |||||||| ||||||||||| ||||| || || || || || ||
Sbjct: 384 tatgaagacaagacagaatggggcaaagagattggatggatctacggttctgtgacagaa 325
Query: 1583 gatatcttaactggcttcaagatgcactgc-cgagggtggagatcaatctactgcatgcc 1641
||||| |||||||| || |||||||| ||| || || |||| ||||||||| || |||||
Sbjct: 324 gatattttaactgggtttaagatgca-tgcacgtggttggatatcaatctattgtatgcc 266
Query: 1642 tctaagacctgcattcaaagggtctgcacccatcaatctttctgatcgattgcaccaggt 1701
|| | | || ||||| |||||||||| || ||||||||||||||||| ||| |||||||
Sbjct: 265 tccacgcccagcatt-taagggtctgctcctatcaatctttctgatcggttgaaccaggt 207
Query: 1702 tctccgatgggcccttgggtctgtagaaattttcttgagcagacactgtcccctctggta 1761
|| || |||||| | || || | |||||||| ||||||| || ||||| | |||||
Sbjct: 206 gcttcggtgggccttgggatcaattgaaattttgctgagcaggcattgtccaatatggta 147
Query: 1762 tggtta 1767
||||||
Sbjct: 146 tggtta 141
Score = 89.7 bits (45), Expect = 3e-17
Identities = 120/145 (82%)
Strand = Plus / Minus
Query: 1034 tttgatggcatagataagagcgatcgatatgccaatagaaatgtggttttctttgacgtt 1093
||||||||||| ||| | |||||||||||||||| | ||| | || |||||||| |
Sbjct: 873 tttgatggcattgatttgcacgatcgatatgccaatcgtaatattgtgttctttgatatc 814
Query: 1094 aacatgaaaggtcttgatggcatccaaggaccagtatatgtgggaacaggttgtgttttc 1153
||| ||||||| |||||||||||||| || ||||| ||||| || || |||||| ||||
Sbjct: 813 aacttgaaagggcttgatggcatccagggtccagtctatgttggtactggttgttgtttc 754
Query: 1154 aataggcaagcactctatggttatg 1178
|| ||||||||||| ||||||||||
Sbjct: 753 aacaggcaagcactatatggttatg 729
Score = 81.8 bits (41), Expect = 7e-15
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 587 tttgtgaaagaacgcagagcaatgaaaagagattatgaagagtacaaagttcgagttaat 646
||||| ||||| ||| |||||||||||||||| |||||||||| ||| || || | |||
Sbjct: 1320 tttgtaaaagagcgccgagcaatgaaaagagaatatgaagagttcaaggtgcggatcaat 1261
Query: 647 gccttagtagcaaaggctcagaaaacacctgatgaaggttggactatgcaggatggaaca 706
||| | || || || || ||||| | ||||| ||||||||||| ||||| ||||| ||
Sbjct: 1260 gcccttgttgctaaagcacagaagatgcctgaagaaggttggacaatgcaagatggtact 1201
Query: 707 ccttggcctggaaataa 723
|||||||||||||||||
Sbjct: 1200 ccttggcctggaaataa 1184
>KJC_c00976
Length = 1696
Score = 81.8 bits (41), Expect = 7e-15
Identities = 269/345 (77%)
Strand = Plus / Minus
Query: 413 tgctatgtatctgatgatggtgctgccatgctttcatttgaatccttagcagaaacagca 472
|||||||| ||||||||||||||||| ||| | | |||||| | || | || || ||
Sbjct: 1672 tgctatgtctctgatgatggtgctgcaatgttgacctttgaagctttgtctgagacttca 1613
Query: 473 gagtttgcaaggaaatgggttccattctgcaaaaaatactcaattgaaccaagggctccc 532
|||||||||||||||||||| || |||||||| ||||| ||||| ||| |||||||
Sbjct: 1612 gagtttgcaaggaaatgggtacctttctgcaagaaatataacattgagccacgggctcca 1553
Query: 533 gagttttacttctcacagaagattgattatttaaaagataaagtgcagccttcttttgtg 592
|| | ||||| | ||||||||||| || || ||||| ||||| || | || |||||
Sbjct: 1552 gaatggtactttgctcagaagattgactacttgaaagacaaagttcaaacatcatttgta 1493
Query: 593 aaagaacgcagagcaatgaaaagagattatgaagagtacaaagttcgagttaatgcctta 652
|| || || ||||| ||||| ||||| |||||||| | ||||| || ||||||| |
Sbjct: 1492 aaggatcgtagagctatgaagagagaatatgaagaatttaaagtccgtgttaatgggctt 1433
Query: 653 gtagcaaaggctcagaaaacacctgatgaaggttggactatgcaggatggaacaccttgg 712
|| |||||||| || ||| ||||| ||||| |||| |||||| ||||| || || |||
Sbjct: 1432 gttgcaaaggcacaaaaagttcctgaggaaggatggattatgcaagatggtaccccatgg 1373
Query: 713 cctggaaataacccacgtgaccaccctggcatgattcaggttttc 757
|| ||||||||| | | ||||| ||||| ||||| |||||||||
Sbjct: 1372 ccaggaaataacaccagagaccatcctggaatgatccaggttttc 1328
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1019 cagtttcctcagagatttgatggcatagataagagcgatcgatatgccaat 1069
|||||||| |||||||||||||| || |||| || |||||||||||||||
Sbjct: 1066 cagtttccccagagatttgatggtattgataggaatgatcgatatgccaat 1016
>KJC_c03583
Length = 483
Score = 73.8 bits (37), Expect = 2e-12
Identities = 118/145 (81%)
Strand = Plus / Minus
Query: 1986 gtggtgttggcatagaagatttgtggcgtaacgagcagttttgggtgattggaggtgttt 2045
|||||||||| ||||| || | |||| | || ||||||||||||||||||||||| ||||
Sbjct: 296 gtggtgttggtatagacgactggtggagaaatgagcagttttgggtgattggaggcgttt 237
Query: 2046 cagcccatttatttgccgtcttccaaggaatgttgaaaatgttggctggaattgatacca 2105
|| | ||| | ||||| ||||||| || || |||| |||||||||| | | || |
Sbjct: 236 catcacatctttttgctctcttccagggtttgctgaaggtgttggctggtgtcaacacaa 177
Query: 2106 acttcactgtcactgcaaaagcagc 2130
|||||||||||||| ||||||||||
Sbjct: 176 acttcactgtcacttcaaaagcagc 152
>KJC_c12964
Length = 624
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 1109 gatggcatccaaggaccagtatatgtgggaacaggttgtgttttcaatag 1158
|||||||||||||| || || || ||||| ||||||||||||||||||||
Sbjct: 429 gatggcatccaaggccctgtgtacgtgggtacaggttgtgttttcaatag 380
>KJC_c01756
Length = 1412
Score = 60.0 bits (30), Expect = 3e-08
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 105 ttttcttccattacagaataacaaatcctgtagatagtgcttatcctctgtggattactt 164
||||||| || ||| |||||||||||||||| || ||| ||||| ||||| | | |
Sbjct: 1158 ttttcttgcactaccgaataacaaatcctgtgactaatgcatatccattgtggttaatat 1217
Query: 165 ctgtcatatgtgagatttggtttgcattttcctgggtgttggatcaattccctaagtggt 224
|||| |||||||||||||||||||| | |||||| | |||||||| ||||| || |||
Sbjct: 1218 ctgtgatatgtgagatttggtttgctatgtcctggattttggatcagttcccaaaatggc 1277
Query: 225 gtcctgttaatagggaaacatacattgacaggct 258
||||| || |||||||||| ||||||||||
Sbjct: 1278 tccctgtgaaccgggaaacatatcttgacaggct 1311
>KJC_c09914
Length = 423
Score = 54.0 bits (27), Expect = 2e-06
Identities = 93/115 (80%)
Strand = Plus / Minus
Query: 2024 ttttgggtgattggaggtgtttcagcccatttatttgccgtcttccaaggaatgttgaaa 2083
||||||||||||||||| || ||||| ||| ||||||| || ||||| || |||| ||
Sbjct: 243 ttttgggtgattggaggagtgtcagcacatctatttgctgttttccagggtctgttaaag 184
Query: 2084 atgttggctggaattgataccaacttcactgtcactgcaaaagcagcagaagatg 2138
| ||||||| ||||||| ||||||||||| || ||||||||| ||| ||||
Sbjct: 183 gttctggctggtgttgatacaaacttcactgtgacatcaaaagcaggagacgatg 129
>KJC_c06231
Length = 457
Score = 52.0 bits (26), Expect = 7e-06
Identities = 86/106 (81%)
Strand = Plus / Plus
Query: 1073 aatgtggttttctttgacgttaacatgaaaggtcttgatggcatccaaggaccagtatat 1132
|||||||| |||||||| ||||||||||||| | ||||| | |||||||| |||||
Sbjct: 258 aatgtggtgttctttgatattaacatgaaagggttagatggtttgcaaggacctatatat 317
Query: 1133 gtgggaacaggttgtgttttcaataggcaagcactctatggttatg 1178
|| ||||| || ||||||||| ||| |||||| ||||||||||
Sbjct: 318 gttggaactgggtgtgttttccgaagggtagcactttatggttatg 363