Jatropha Genome Database
- JcCA0143661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0143661.10 + phase: 0 /pseudo/partial
(663 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02668 632 0.0
>KJC_c02668
Length = 825
Score = 632 bits (319), Expect = 0.0
Identities = 326/327 (99%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 1 atggctggtatcgaagaattcctaggagagttgaacagggaatccttcgtttccctgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggctggtatcgaagaattcctaggagagttgaacagggaatccttcgtttccctgctg 81
Query: 61 agaaagatcataggagagtccaaacatgtccaaaacaatccaccagagctgatccccaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 82 agaaagatcataggagagtccaaacatgtccaaaacaatccaccagagctgatccc-aga 140
Query: 121 ggaagacagggtggtgaagcacgtgctggattctctccttccttatagcaccacttctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ggaagacagggtggtgaagcacgtgctggattctctccttccttatagcaccacttctgg 200
Query: 181 aggaggtcccttgattgtaaatcatgtctcttacttccctggccgaggcaatcttattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaggtcccttgattgtaaatcatgtctcttacttccctggccgaggcaatcttattgt 260
Query: 241 ggagtatccaggcactgagccaggaaaggttttgtcttttgttggcatgcacatggatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagtatccaggcactgagccaggaaaggttttgtcttttgttggcatgcacatggatgt 320
Query: 301 tgtcactgccaatcctaatgactggga 327
|||||||||||||||||||||||||||
Sbjct: 321 tgtcactgccaatcctaatgactggga 347
Score = 575 bits (290), Expect = e-164
Identities = 297/298 (99%), Gaps = 1/298 (0%)
Strand = Plus / Plus
Query: 325 ggagttggtgttgatgcacttgtgaaagatgggctgcttaataagctgaaaggaggtcct 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ggagttggtgttgatgcacttgtgaaagatgggctgcttaataagctgaaaggaggtcct 588
Query: 385 ttattctggattgacactgcagataaacaaccttgcattggtactggcggtatgatacct 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttattctggattgacactgcagataaacaaccttgcattggtactggcggtatgatacct 648
Query: 445 tggaaacttcatgtaacagggaaactttttcacagtggtttagcacacaaggctataaat 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tggaaacttcatgtaacagggaaactttttcacagtggtttagcacacaaggctataaat 708
Query: 505 cctttggagctagctatggaggcactcaaagagatacaatcacgattttatagggacttc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cctttggagctagctatggaggcactcaaagagatacaatcacgattttatagggacttc 768
Query: 565 cctcctcatccaaaagagaaagtctatggatttgcaaccccctcgacgatgaagccaa 622
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 769 cctcctcatccaaaagagaaagtctatggatttgcaaccccct-gacgatgaagccaa 825