Jatropha Genome Database
- JcCA0142191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0142191.10 + phase: 0
(1098 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00773 323 5e-88
KJC_s19315 151 4e-36
KJC_s20684 76 2e-13
KJC_c00670 62 3e-09
>KJC_c00773
Length = 1304
Score = 323 bits (163), Expect = 5e-88
Identities = 286/327 (87%)
Strand = Plus / Minus
Query: 420 tggaattcttggtatgcctgggataactgcttatgctggattttacgaggttggtgctcc 479
|||||||||||||||| ||||| |||| ||||||||||| ||||| ||||||||||||||
Sbjct: 707 tggaattcttggtatgtctgggttaacagcttatgctggtttttatgaggttggtgctcc 648
Query: 480 taagaaaggagattatgtgtttgtttcagcagcttctggcggaataggtcaaattgttgg 539
||||||||||||||||||||| ||||||||||||||||| | | | ||||| |||||||
Sbjct: 647 taagaaaggagattatgtgttcgtttcagcagcttctggtgcagttggtcagcttgttgg 588
Query: 540 gcaatttgcaaagttggctggttgctatgttgttgggagtgctggaagtacggagaaagt 599
||||| ||||||||| | ||||| ||||| ||||| ||||||||||| | || |||||
Sbjct: 587 ccaattcgcaaagttgtcaggttgttatgtggttggaagtgctggaagcaaagaaaaagt 528
Query: 600 tgatttgttgaagaataaatttggattcgatgaggctttcaattataacgaagaaaagga 659
||||||||||||||| || ||||||||||| |||||||||||||| || |||||| ||||
Sbjct: 527 tgatttgttgaagaacaagtttggattcgacgaggctttcaattacaatgaagaacagga 468
Query: 660 tttggatgcagctttgaaaaggtattttcctgaaggcatcgacctatattttgatattgt 719
|||||||||||||||||||| ||||||||| |||| ||||| |||||||||| | |||
Sbjct: 467 cttggatgcagctttgaaaagatattttcctcaaggaatcgatatatattttgaaaatgt 408
Query: 720 tggtggaaaaatgctcgacgcagttct 746
|||||| || ||||| || ||||||||
Sbjct: 407 tggtggtaagatgctggaagcagttct 381
Score = 67.9 bits (34), Expect = 5e-11
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 78 agaatcagacatgtacctgagtagtaattcgatcaaacttcaagtcccagaaggtagtaa 137
|||||||||||||| |||||| ||| ||||||||||| |||| |||||||| | |||
Sbjct: 1037 agaatcagacatgtttttgagtactaaaacgatcaaacttgaagtgccagaaggaactaa 978
Query: 138 cggaattgttgtcaagaatctctacttgtcttgtgatc 175
|| || ||||||||||||| || |||||||||||||
Sbjct: 977 tggtgttcttgtcaagaatctgtatttgtcttgtgatc 940
>KJC_s19315
Length = 535
Score = 151 bits (76), Expect = 4e-36
Identities = 162/188 (86%), Gaps = 2/188 (1%)
Strand = Plus / Minus
Query: 502 gtttcagcagcttctggcggaataggtcaaattgttgggcaattt-gcaaagttggctgg 560
||||||||||||||||| | | | ||||| ||||||| ||||| ||||||||| | ||
Sbjct: 526 gtttcagcagcttctggtgcagttggtcagcttgttggccaattacgcaaagttgtcagg 467
Query: 561 ttgctatgttgttgggagtgctggaagtacggagaaagttgatttgttgaagaataaatt 620
||| ||||| ||||| ||||||||||| | | | |||||||||||||||||||| || ||
Sbjct: 466 ttgttatgtggttggaagtgctggaagcaagaa-aaagttgatttgttgaagaacaagtt 408
Query: 621 tggattcgatgaggctttcaattataacgaagaaaaggatttggatgcagctttgaaaag 680
||||||||| |||||||||||||| || |||||| |||| ||||||||||||||||||||
Sbjct: 407 tggattcgacgaggctttcaattacaatgaagaacaggacttggatgcagctttgaaaag 348
Query: 681 gtattttc 688
||| ||||
Sbjct: 347 gtactttc 340
>KJC_s20684
Length = 415
Score = 75.8 bits (38), Expect = 2e-13
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 504 ttcagcagcttctggcggaataggtcaaattgttgggcaatttgcaaagttggctggttg 563
||||||||||||||| | | | ||||| ||||||| ||||| ||||||||| | |||||
Sbjct: 106 ttcagcagcttctggtgcagttggtcagcttgttggccaattcgcaaagttgtcaggttg 47
Query: 564 ctatgttgttgggagtgctggaagtacggagaaagttgatttgttg 609
||||| ||||| ||||||||||| | || |||||||||||||||
Sbjct: 46 ttatgtggttggaagtgctggaagcaaagaaaaagttgatttgttg 1
>KJC_c00670
Length = 703
Score = 61.9 bits (31), Expect = 3e-09
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 533 ttgttgggcaatttgcaaagttggctggttgctatgttgttgggagtgctggaagtacgg 592
|||||||||| |||||||||||| |||||||||||||| || || |||||||||
Sbjct: 180 ttgttgggcagtttgcaaagttgatgggttgctatgttgtgggcagcgctggaagtcaac 121
Query: 593 agaaagttgatttgttgaagaataaatttggattcgatgaggctttcaattataa 647
| || ||||| || |||| ||| || ||||| ||||||| ||||||||||||||
Sbjct: 120 aaaaggttgacttattgacgaacaagtttggtttcgatgctgctttcaattataa 66
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 148 gtcaagaatctctacttgtcttgtgatc 175
||||||||||||||||||||||||||||
Sbjct: 559 gtcaagaatctctacttgtcttgtgatc 532