Jatropha Genome Database
- JcCA0141381.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0141381.10 + phase: 1 /partial
(662 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04784 1090 0.0
>KJC_c04784
Length = 889
Score = 1090 bits (550), Expect = 0.0
Identities = 634/658 (96%), Gaps = 3/658 (0%)
Strand = Plus / Minus
Query: 1 aacaaagaatgagtagaggaagtggaggtggttacgatcgccatatcacaatcttctccc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 879 aacaaagaatgagtagaggaagtggaggtggttacgatcgtcatatcacaatcttctccc 820
Query: 61 ctgaaggtcgtcttttccaagtcgaatatgcgtttaaggctgtaaaggcagctgccatca 120
| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 819 ccgaaggtcgcctcttccaagtcgaatatgcgtttaaggcggtaaaggcagctgccatta 760
Query: 121 cttcgatcggagttcgcggaaaggactctgtctgtgttgtcacgcagaagaaagttccag 180
|||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 759 cttcgatcggagttcgtggaaaggactctgtctgtgttgtcacacagaagaaggttccgg 700
Query: 181 acaagcttttggatcagactagtgttacccacctttttcctattaccaagtaccttggat 240
||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||
Sbjct: 699 acaagcttttggatcagactagtgtcactaacctttttcc-attaccaagtaccttggat 641
Query: 241 tattggctactggcatgaccgctgatgcaagaactttggtccagcaagcacggaatgagg 300
| ||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 640 tgttggctactgggatgacagctgatgcaagaactt-ggtccagcaagcacggaatgagg 582
Query: 301 cagctgagtttcgtttcagatatggatatgaaatgcctgtagatgtattggccaaatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cagctgagtttcgtttcagatatggatatgaaatgcctgtagatgtattggccaaatgga 522
Query: 361 tagcagataaatcacaggtttacactcagcatgcttacatgagaccccttggagtagttg 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tagcagacaaatcacaggtttacactcagcatgcttacatgagaccccttggagtagttg 462
Query: 421 ctatggtcttgggcattgatgaggagaatgggcctcagctctacaagtgtgatccagctg 480
||||| |||| || |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 461 ctatg-tcttaggtattgatgaagagaatgggcctcaactctacaagtgtgatccagctg 403
Query: 481 gccacttctacggtcacaaggccacaagtgctggattgaaagaacaagaggctattaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gccacttctacggtcacaaggccacaagtgctggattgaaagaacaagaggctattaatt 343
Query: 541 ttttggaaaagaaaatgaaaaatgaccctgctttctcctatgaggaaactgtgcagactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttttggaaaagaaaatgaaaaatgaccctgctttctcctatgaggaaactgtgcagactg 283
Query: 601 ccatttcggctctacaatctattctgcaagaggacttcaaggctactgagattgaggt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ccatttcggctctacaatctattctgcaagaggacttcaaggctactgagattgaggt 225