Jatropha Genome Database
- JcCA0137791.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0137791.10 - phase: 0
(1026 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10538 1104 0.0
KJC_c10641 96 2e-19
KJC_c09136 96 2e-19
KJC_s13946 88 5e-17
KJC_s13646 88 5e-17
KJC_c13295 80 1e-14
KJC_c09956 80 1e-14
KJC_c03235 80 1e-14
KJC_s17200 66 2e-10
>KJC_c10538
Length = 670
Score = 1104 bits (557), Expect = 0.0
Identities = 569/573 (99%)
Strand = Plus / Plus
Query: 55 acgtcgccgacgtcatctggcaaggcggagcccaacgctccactctccgcttccgagatc 114
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 98 acgtcgccgacgtcatctggcaaggcggagccaacggctccactctccgcttccgagatc 157
Query: 115 ctcgcacgcgtccacccttccggcggcgatccagagaatcttcagcgcatcctccgtatg 174
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ctcgcacgcgtccacctttccggcggcgatccagagaatcttcagcgcatcctccgtatg 217
Query: 175 ctcacaagctacgatgtctttacagaacacgttaattccgatgccaccgaaaggagatac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ctcacaagctacgatgtctttacagaacacgttaattccgatgccaccgaaaggagatac 277
Query: 235 tctttaacggagatcggaaaaacgcttgtcaccgacagtgaaggcctttcctacgcatct 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tctttaacggagatcggaaaaacgcttgtcaccgacagtgaaggcctttcctacgcatct 337
Query: 295 tacgttctccagcaccaccaggatgcactgatgagggcctggccgttagtgcacgaggcc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tacgttctccagcaccaccaggatgcactgatgagggcctggccgttagtgcacgaggcc 397
Query: 355 gtggtggatccgacgacggagccgttcgtaaaggccaatgacgagcctgcgtatgcttat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gtggtggatccgacgacggagccgttcgtaaaggccaatgacgagcctgcgtatgcttat 457
Query: 415 tatggtaagcagccagaaatgaacggtttgatgcaaaaggcaatgtcaggtgtatctgtg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tatggtaagcagccagaaatgaacggtttgatgcaaaaggcaatgtcaggtgtatctgtg 517
Query: 475 ccgttcatgaaggccatattgaatggctacgatggatttcaaggtatggagaaattggtc 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ccgttcatgaaggccatattgaatggctacgatggatttcaaggtatggagaaattggtc 577
Query: 535 gatgtaggcggaagtgcaggagattgccttagaatgatactgaagaaatatccaaacata 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gatgtaggcggaagtgcaggagattgccttagaatgatactgaagaaatatccaaacata 637
Query: 595 cgtgaaggaatcaattttgatttgcctgaagtt 627
|||||||||||||||||||||||||||||||||
Sbjct: 638 cgtgaaggaatcaattttgatttgcctgaagtt 670
>KJC_c10641
Length = 696
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 atgcttcataaaggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 542 atgcttcattaaggattgcaaactcaatataaattaatgcgcaaaatcggtgccac 487
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 1 atgcttcataaaggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 184 atgcttcattaaggattgcaaactcaatacaaattaatgcacaaaatcggtgccac 129
>KJC_c09136
Length = 460
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 1 atgcttcataaaggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 308 atgcttcattaaggattgcaaactcaatataaattaatgcgcaaaatcggtgccac 363
>KJC_s13946
Length = 291
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 5 ttcataaaggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 115 ttcattaaggattgcaaactcaatataaattaatgcgcaaaatcggtgccac 64
>KJC_s13646
Length = 106
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 1 atgcttcataaaggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 47 atgcttcattaaggattgcaaactcaatacaaattaatgcgcaaaatcggtgccac 102
>KJC_c13295
Length = 195
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 13 ggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 95 ggattgcaaactcaatataaattaatgcgcaaaatcggtgccac 138
>KJC_c09956
Length = 343
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 1 atgcttcataaaggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 208 atgcttcattaaggattgcaaactcaatacaaattaatgctcaaaatcggtgccac 153
>KJC_c03235
Length = 501
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1 atgcttcataaaggattgcaaactcaatataaattaatgcgcaaaatcggttccac 56
||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 399 atgcttcattaaggattgcaaactcaatacaaattaattcgcaaaatcggtgccac 454
Score = 61.9 bits (31), Expect = 3e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 3 gcttcataaaggattgcaaa-ctcaatataaattaatgcgcaaaatcggttccac 56
||||||| |||||||||||| ||||||| ||||||||| ||||||||||| ||||
Sbjct: 41 gcttcattaaggattgcaaaactcaatacaaattaatgtgcaaaatcggtgccac 95
>KJC_s17200
Length = 190
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 1 atgcttcataaaggattgcaaactcaatataaattaatgcgcaaa 45
||||||||| ||||||| ||||||||||| |||||||||||||||
Sbjct: 160 atgcttcattaaggattccaaactcaatacaaattaatgcgcaaa 116