Jatropha Genome Database
- JcCA0137431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0137431.10 - phase: 0
(1293 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00801 1009 0.0
KJC_c07266 777 0.0
KJC_c10030 684 0.0
>KJC_c00801
Length = 1403
Score = 1009 bits (509), Expect = 0.0
Identities = 1068/1253 (85%), Gaps = 1/1253 (0%)
Strand = Plus / Plus
Query: 37 atcaaggacgagaagaatcctcgtcctcttgatgaagacgatattgccctcctcaagacc 96
||||||||||||||||| ||||||||||||||||||||||| || || || ||||| ||
Sbjct: 104 atcaaggacgagaagaaccctcgtcctcttgatgaagacgacatcgctcttctcaaaact 163
Query: 97 tatggtttaggtccatattcaaacagcattaagaaagaggagaaggaaatcaaggaactg 156
||||| ||||| |||||||| || ||||||||||||| ||||||||||| |||||| ||
Sbjct: 164 tatggattaggaccatattctaatagcattaagaaagccgagaaggaaataaaggaaatg 223
Query: 157 gctaagaagatcaatgacctctgtggtatcaaggaatcggacactgggttagctgcacca 216
|||||||| | ||||| || |||||||||||||| || |||||||| |||||||||||
Sbjct: 224 gctaagaaagtaaatgatctatgtggtatcaaggagtctgacactggtttagctgcaccc 283
Query: 217 agtcagtgggatcttgtttctgataagcaaatgatgcaggaggagcaacctcttcaagtt 276
|| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 284 agccagtgggatcttgtatctgacaagcaaatgatgcaggaggagcagcctcttcaagtg 343
Query: 277 gcaaggtgtactaaaatcattaatccaaatacggatgatgccaagtatgtcataaatgtc 336
|||||||| || || || || ||||| || || || |||||||| ||||| ||||||||
Sbjct: 344 gcaaggtgcacaaagattataaatcctaacactgaggatgccaaatatgtaataaatgtg 403
Query: 337 aagcaaattgctaagtttgtggttggacttggtgacaaagtctctcctactgatatagaa 396
|| |||||||| |||||||| ||||| || |||||||| || || || ||||||||||||
Sbjct: 404 aa-caaattgcaaagtttgtagttgggctgggtgacaaggtatcgccaactgatatagaa 462
Query: 397 gaaggcatgcgagtgggagttgatcgcaacaagtaccagattcagattcccttgcctccg 456
||||||||||| || || || |||||||||||||| ||||| |||||||||||||||||
Sbjct: 463 gaaggcatgcgtgttggcgtagatcgcaacaagtatcagatacagattcccttgcctcca 522
Query: 457 aagattgatcccagtgttacaatgatgactgtagaagaaaagcctgatgtaacatataat 516
|| |||||||| ||||| ||||||||||| || ||||| || |||||||| |||||||||
Sbjct: 523 aaaattgatccaagtgtgacaatgatgacagtggaagagaaacctgatgtgacatataat 582
Query: 517 gatgttggtggctgtaaagagcagatcgaaaagatgagagaagtcgtggagcttcccatg 576
|| |||||||| ||||| |||||||| ||||||||| ||||||| || || || ||||||
Sbjct: 583 gacgttggtggatgtaaggagcagattgaaaagatgcgagaagttgttgaactacccatg 642
Query: 577 cttcatccagagaaatttgtgaaacttggaattgatcctcctaagggtgtcttatgctat 636
||||| || |||||||||||||| |||||||||||||||||||| ||||| | ||||||
Sbjct: 643 cttcaccctgagaaatttgtgaagcttggaattgatcctcctaaaggtgttctctgctat 702
Query: 637 ggtcctcctggaactggcaaaactcttttggccagagctgtggccaacagaactgatgca 696
||||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||||||
Sbjct: 703 ggtcctcctggaactgggaaaacacttttagctagagcagtggctaatagaactgatgct 762
Query: 697 tgttttattcgtgttattggaagtgaacttgttcaaaaatatgttggtgagggtgcccgc 756
||||| ||| | ||||||||||| || |||||||| ||||| |||||||| || || |
Sbjct: 763 tgtttcattagagttattggaagcgagcttgttcagaaatacgttggtgaaggagcaagg 822
Query: 757 atggttcgggaacttttccagatggcacggtcaaagaaggcctgcatagtcttttttgat 816
|||||||| || ||||| ||||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 823 atggttcgcgagctttttcagatggcacgttcaaagaaggcttgcattgtattctttgat 882
Query: 817 gaagttgatgcaataggtggtgctcgttttgatgacggtgtgggtggggataatgaggtt 876
||||||||||| ||||||||||| |||||||| || ||||||||||| || ||||| ||
Sbjct: 883 gaagttgatgctataggtggtgcacgttttgacgatggtgtgggtggagacaatgaagtc 942
Query: 877 cagcgtacaatgcttgaaattgtcaatcagcttgacggttttgatgctcgaggaaacatc 936
||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct: 943 cagcgtacaatgcttgaaattgtgaatcagcttgatggttttgatgcccgtggaaacata 1002
Query: 937 aaagtcttgatggcaacgaacagacctgatacacttgatccagcattgttgcgtccaggg 996
||||| | |||||||| ||||| ||||| || || ||||||||| | |||||||| ||
Sbjct: 1003 aaagttcttatggcaacaaacaggcctgacaccctagatccagcactattgcgtcctgga 1062
Query: 997 agactggatcgtaaggttgagtttgggttaccggatttggagagcagggcacagattttt 1056
|| | ||||||||||| |||||||| | ||||||||||| || || | ||||| |||
Sbjct: 1063 cgattagatcgtaaggtggagtttggtcttccggatttggaaagtagaactcagatattt 1122
Query: 1057 aagatccatacaagaactatgaattgtgagagagatattcgttttgagctccttgcacgt 1116
||||||||||||||||| |||||||| || |||||||| || |||||||| | || ||
Sbjct: 1123 aagatccatacaagaacaatgaattgcgaaagagatatccggtttgagcttttggctcgg 1182
Query: 1117 ctttgtccaaattccactggagctgacattaggagtgtctgcactgaggctgggatgtat 1176
||||| |||||||| || |||||||| ||||||||||| || ||||| ||||| |||| |
Sbjct: 1183 ctttgcccaaattcaaccggagctgatattaggagtgtatgtactgaagctggcatgttt 1242
Query: 1177 gccattagggcacgcaggaagacagtaactgagaaagactttctggatgcagtaaacaaa 1236
|| ||| | ||||| ||||||||||| || ||||||||||| || |||||||| ||||||
Sbjct: 1243 gcaattcgagcacggaggaagacagtgacagagaaagacttccttgatgcagtgaacaaa 1302
Query: 1237 gtcatcaaggggtatcaaaagttcagtgcaacccctaagtacatggtctacaa 1289
|| || || || || || || |||||||||||||| || |||||||| |||||
Sbjct: 1303 gtaattaaaggataccagaaattcagtgcaaccccaaaatacatggtgtacaa 1355
>KJC_c07266
Length = 577
Score = 777 bits (392), Expect = 0.0
Identities = 406/408 (99%), Gaps = 2/408 (0%)
Strand = Plus / Plus
Query: 1 atggcacctgcggcgactcaagaagatgatgagataatcaaggacgagaagaatcctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggcacctgcggcgactcaagaagatgatgagataatcaaggacgagaagaatcctcgt 230
Query: 61 cctcttgatgaagacgatattgccctcctcaagacctatggtttaggtccatattcaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cctcttgatgaagacgatattgccctcctcaagacctatggtttaggtccatattcaaac 290
Query: 121 agcattaagaaagaggagaaggaaatcaaggaactggctaagaagatcaatgacctctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agcattaagaaagaggagaaggaaatcaaggaactggctaagaagatcaatgacctctgt 350
Query: 181 ggtatcaaggaatcggacactgggttagctgcaccaagtcagtgggatcttgtttctgat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 351 ggtatcaaggaatcggacactgggttagctgcaccaagtcagtgggatcttg-ttctgat 409
Query: 241 aagcaaatgatgcaggaggagcaacctcttcaagttgcaaggtgtactaaaatcattaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aagcaaatgatgcaggaggagcaacctcttcaagttgcaaggtgtactaaaatcattaat 469
Query: 301 ccaaatacggatgatgccaagtatgtcataaatgtcaagcaaattgctaagtttgtggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ccaaatacggatgatgccaagtatgtcataaatgtcaagcaaattgctaagtttgtggtt 529
Query: 361 ggacttggtgacaaagtct-ctcctactgatatagaagaaggcatgcg 407
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 530 ggacttggtgacaaagtctactcctactgatatagaagaaggcatgcg 577
>KJC_c10030
Length = 388
Score = 684 bits (345), Expect = 0.0
Identities = 383/389 (98%), Gaps = 5/389 (1%)
Strand = Plus / Minus
Query: 398 aaggcatgcgagtgggagttgatcgcaacaagtaccaga-ttcagattcccttgcctccg 456
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 388 aaggcatgcga-tgggagttgatcgcaacaagtaccagacttcagattcccttgcctccg 330
Query: 457 aagattgatcccagtgttacaatgatgactgtagaagaaaagcctgatgtaacatataat 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aagattgatcccagtgttacaatgatgactgtagaagaaaagcctgatgtaacatataat 270
Query: 517 gatgttggtggctgtaaagagcagatcgaaaagatgagagaagtcgtggagcttcccatg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gatgttggtggctgtaaagagcagatcgaaaagatgagagaagtcgtggagcttcccatg 210
Query: 577 cttcatccagagaaatttgtgaaacttggaattgatcctcctaagggtgtcttatgctat 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cttcatccagagaaatttgtgaaacttggaattgatcctcctaagggtgtcttatgctat 150
Query: 637 ggtcctcctggaact-ggcaaaac-tcttttggccagagctgtggccaacagaactgatg 694
||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 149 ggtcctcctggaactagacaaaacttcttttggccagagctgtggccaacagaactgatg 90
Query: 695 catgttttattcgtgttattggaagtgaacttgttcaaaaatatgttggtga-gggtgcc 753
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 89 catgttttattcgtgttattggaagtgaacttgttcaaaaatatgttggtgaggggtgcc 30
Query: 754 cgcatggttcgggaacttttccagatggc 782
|||||||||||||||||||||||||||||
Sbjct: 29 cgcatggttcgggaacttttccagatggc 1