Jatropha Genome Database
- JcCA0136741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0136741.10 - phase: 0 /partial
(1497 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00182 2968 0.0
KJC_s19160 624 e-178
KJC_c12958 527 e-149
KJC_s18588 498 e-140
KJC_s18837 172 2e-42
KJC_c00062 117 8e-26
KJC_c00240 62 4e-09
>KJC_c00182
Length = 2760
Score = 2968 bits (1497), Expect = 0.0
Identities = 1497/1497 (100%)
Strand = Plus / Minus
Query: 1 gaagctatagttgtccctccttttgtggcaatagccattcgtccaaggcctggtgtctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2494 gaagctatagttgtccctccttttgtggcaatagccattcgtccaaggcctggtgtctgg 2435
Query: 61 gaatatgtccgcgtcaatgtctttcaacttagtgtggagcaattgagtgtttctgaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2434 gaatatgtccgcgtcaatgtctttcaacttagtgtggagcaattgagtgtttctgaatat 2375
Query: 121 cttcgcttcaaagaagaacttgtagacgggccgtccaatgatccctatgtacttgaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 cttcgcttcaaagaagaacttgtagacgggccgtccaatgatccctatgtacttgaactt 2315
Query: 181 gattttgagccattcaatgctgatgttcctcgccccaaccggtcttcatcgattggcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 gattttgagccattcaatgctgatgttcctcgccccaaccggtcttcatcgattggcaat 2255
Query: 241 ggtgttcaattcctcaatcgccatctctcttcaatcatgtttaggaacaaggactgtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2254 ggtgttcaattcctcaatcgccatctctcttcaatcatgtttaggaacaaggactgtctg 2195
Query: 301 gagcctttaaataatttccttcgagcacataaatataaagggcatcccttgatgttgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 gagcctttaaataatttccttcgagcacataaatataaagggcatcccttgatgttgaat 2135
Query: 361 gataggatacagagcatatcaagacttcaatctgcccttgttaaggcagaagaatatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2134 gataggatacagagcatatcaagacttcaatctgcccttgttaaggcagaagaatatatt 2075
Query: 421 tctaagcttccacctgatgcaccatattctgagtttgagtatgcattacaaggattgggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 tctaagcttccacctgatgcaccatattctgagtttgagtatgcattacaaggattgggt 2015
Query: 481 tttgagagaggttggggcaatactgcagcgcgtgtactggagacaatgcatcttctcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 tttgagagaggttggggcaatactgcagcgcgtgtactggagacaatgcatcttctcttg 1955
Query: 541 gacatcttgcaagctcctgatccgtcaactttagaaaccttccttgggagaataccgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 gacatcttgcaagctcctgatccgtcaactttagaaaccttccttgggagaataccgatg 1895
Query: 601 gtgtttaatgttgttattttgtctccacatggatactttgggcaagcaaatgttctaggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 gtgtttaatgttgttattttgtctccacatggatactttgggcaagcaaatgttctaggt 1835
Query: 661 ttgcctgacactggtgggcaggttgtttatatactagatcaagtacgtgccctagagagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 ttgcctgacactggtgggcaggttgtttatatactagatcaagtacgtgccctagagagt 1775
Query: 721 gaaatgcttcttagaatacagaaacaaggcctggatttcaagcctaggatacttattgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 gaaatgcttcttagaatacagaaacaaggcctggatttcaagcctaggatacttattgtg 1715
Query: 781 accagattaatacctgatgcaaaaggaacttcatgcaaccagaggttggaaagagtcagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 accagattaatacctgatgcaaaaggaacttcatgcaaccagaggttggaaagagtcagt 1655
Query: 841 ggaacagaatacacgcatattctgagagttcctttcagatcagagaaaggaattcttcga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 ggaacagaatacacgcatattctgagagttcctttcagatcagagaaaggaattcttcga 1595
Query: 901 aaatggatctcaagatttgatgtgtggccttatctggagaactttgctgaggatgtggca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 aaatggatctcaagatttgatgtgtggccttatctggagaactttgctgaggatgtggca 1535
Query: 961 agtgaaattgtagccgagttacaggccgttcctgattttataatagggaactacagtgat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 agtgaaattgtagccgagttacaggccgttcctgattttataatagggaactacagtgat 1475
Query: 1021 gggaatcttgttgcatctttattggcctataaaatgggtgttacacagtgtaccatcgcg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 gggaatcttgttgcatctttattggcctataaaatgggtgttacacagtgtaccatcgcg 1415
Query: 1081 catgccttggagaaaacaaaatatccagattcagatatatattggaaaaaatttgatgat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 catgccttggagaaaacaaaatatccagattcagatatatattggaaaaaatttgatgat 1355
Query: 1141 aaatatcacttctcttgtcaattcactgctgacatattagccatgaacaatgcagatttt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 aaatatcacttctcttgtcaattcactgctgacatattagccatgaacaatgcagatttt 1295
Query: 1201 ataatcactagtacttaccaagaaattgcaggaacgaagaatactgttggtcagtatgaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 ataatcactagtacttaccaagaaattgcaggaacgaagaatactgttggtcagtatgaa 1235
Query: 1261 agtcacactgctttcactctccccggattatatcgagttgttcatggaattgatgtcttt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 agtcacactgctttcactctccccggattatatcgagttgttcatggaattgatgtcttt 1175
Query: 1321 gatcccaagttcaatattgtctctcctggggcagatatgtccatctacttcccatattct 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 gatcccaagttcaatattgtctctcctggggcagatatgtccatctacttcccatattct 1115
Query: 1381 gaaaagcaaaaaaggcttacagccctacatggttccatagagaagatgttgtatgatcct 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 gaaaagcaaaaaaggcttacagccctacatggttccatagagaagatgttgtatgatcct 1055
Query: 1441 gggcagactgatgagtggataggtacactgaaagataagtcaaagccgttaattttt 1497
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 gggcagactgatgagtggataggtacactgaaagataagtcaaagccgttaattttt 998
>KJC_s19160
Length = 532
Score = 624 bits (315), Expect = e-178
Identities = 338/342 (98%), Gaps = 3/342 (0%)
Strand = Plus / Minus
Query: 2 aagctatagttgtccctccttttgtggcaatagccattcgtccaaggcctggtgtctggg 61
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aagctatagttgtccn-ccttttgtggcaatagccattcgtccaaggcctggtgtctggg 474
Query: 62 aatatgtccgcgtcaatgtctttcaacttagtgtggagcaattgagtgtttctgaatatc 121
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 473 aatatgtccgcgtcaatg-ctttcaacttagtgtg-agcaattgagtgtttctgaatatc 416
Query: 122 ttcgcttcaaagaagaacttgtagacgggccgtccaatgatccctatgtacttgaacttg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttcgcttcaaagaagaacttgtagacgggccgtccaatgatccctatgtacttgaacttg 356
Query: 182 attttgagccattcaatgctgatgttcctcgccccaaccggtcttcatcgattggcaatg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 attttgagccattcaatgctgatgttcctcgccccaaccggtcttcatcgattggcaatg 296
Query: 242 gtgttcaattcctcaatcgccatctctcttcaatcatgtttaggaacaaggactgtctgg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gtgttcaattcctcaatcgccatctctcttcaatcatgtttaggaacaaggactgtctgg 236
Query: 302 agcctttaaataatttccttcgagcacataaatataaagggc 343
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agcctttaaataatttccttcgagcacataaatataaagggc 194
>KJC_c12958
Length = 553
Score = 527 bits (266), Expect = e-149
Identities = 273/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 680 aggttgtttat-atactagatcaagtacgtgccctagagagtgaaatgcttcttagaata 738
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aggttgtttattatactagatcaagtacgtgccctagagagtgaaatgcttcttagaata 435
Query: 739 cagaaacaaggcctggatttcaagcctaggatacttattgtgaccagattaatacctgat 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cagaaacaaggcctggatttcaagcctaggatacttattgtgaccagattaatacctgat 375
Query: 799 gcaaaaggaacttcatgcaaccagaggttggaaagagtcagtggaacagaatacacgcat 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gcaaaaggaacttcatgcaaccagaggttggaaagagtcagtggaacagaatacacgcat 315
Query: 859 attctgagagttcctttcagatcagagaaaggaattcttcgaaaatggatctcaagattt 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 attctgagagttcctttcagatcagagaaaggaattcttcgaaaatggatctcaagattt 255
Query: 919 gatgtgtggccttatctggagaactttgctgagg 952
||||||||||||||||||||||||||||||||||
Sbjct: 254 gatgtgtggccttatctggagaactttgctgagg 221
>KJC_s18588
Length = 296
Score = 498 bits (251), Expect = e-140
Identities = 258/259 (99%), Gaps = 1/259 (0%)
Strand = Plus / Minus
Query: 750 cctggatttcaagcctaggatacttattgtgaccagattaatacctgatgcaaaaggaac 809
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 258 cctggatttcaagcctaggatacttattgtgaccagattaatacctgatgcaaa-ggaac 200
Query: 810 ttcatgcaaccagaggttggaaagagtcagtggaacagaatacacgcatattctgagagt 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttcatgcaaccagaggttggaaagagtcagtggaacagaatacacgcatattctgagagt 140
Query: 870 tcctttcagatcagagaaaggaattcttcgaaaatggatctcaagatttgatgtgtggcc 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tcctttcagatcagagaaaggaattcttcgaaaatggatctcaagatttgatgtgtggcc 80
Query: 930 ttatctggagaactttgctgaggatgtggcaagtgaaattgtagccgagttacaggccgt 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ttatctggagaactttgctgaggatgtggcaagtgaaattgtagccgagttacaggccgt 20
Query: 990 tcctgattttataataggg 1008
|||||||||||||||||||
Sbjct: 19 tcctgattttataataggg 1
>KJC_s18837
Length = 503
Score = 172 bits (87), Expect = 2e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1294 cgagttgttcatggaattgatgtctttgatcccaagttcaatattgtctctcctggggca 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgagttgttcatggaattgatgtctttgatcccaagttcaatattgtctctcctggggca 60
Query: 1354 gatatgtccatctacttcccatattct 1380
|||||||||||||||||||||||||||
Sbjct: 61 gatatgtccatctacttcccatattct 87
>KJC_c00062
Length = 1646
Score = 117 bits (59), Expect = 8e-26
Identities = 284/359 (79%)
Strand = Plus / Minus
Query: 991 cctgattttataatagggaactacagtgatgggaatcttgttgcatctttattggcctat 1050
|||||||| || || || |||||||||||||| || ||||||| || || || || |
Sbjct: 1285 cctgatttgatcattggaaactacagtgatggaaacattgttgcttccttgttagctcac 1226
Query: 1051 aaaatgggtgttacacagtgtaccatcgcgcatgccttggagaaaacaaaatatccagat 1110
||| | ||||||||| ||||||| || || ||||| | || ||||| |||||||||||
Sbjct: 1225 aaattaggtgttacagagtgtacaattgctcatgctctagaaaaaaccaaatatccagaa 1166
Query: 1111 tcagatatatattggaaaaaatttgatgataaatatcacttctcttgtcaattcactgct 1170
||||| || || ||||| || |||||||| || || || ||||| || || || || |||
Sbjct: 1165 tcagacatctactggaagaagtttgatgaaaagtaccatttctcatgccagtttacagct 1106
Query: 1171 gacatattagccatgaacaatgcagattttataatcactagtacttaccaagaaattgca 1230
|| | || |||||||| || ||||||| || ||||| ||||| | ||||||||||||
Sbjct: 1105 gatctttttgccatgaatcatacagatttcatcatcaccagtacattccaagaaattgct 1046
Query: 1231 ggaacgaagaatactgttggtcagtatgaaagtcacactgctttcactctccccggatta 1290
|||| ||| | ||||||||||| ||||| || ||||| |||||||| || || || |
Sbjct: 1045 ggaagcaaggacactgttggtcaatatgagagccacacagctttcacccttcctgggctc 986
Query: 1291 tatcgagttgttcatggaattgatgtctttgatcccaagttcaatattgtctctcctgg 1349
|| |||| |||||||| |||||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 985 tacagagtcgttcatggtattgatgtgtttgatcccaaattcaacattgtctcccctgg 927
>KJC_c00240
Length = 1175
Score = 61.9 bits (31), Expect = 4e-09
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 589 agaataccgatggtgtttaatgttgttattttgtctccacatggatactttgggcaagca 648
|||||||| ||||| || || ||||| ||| ||||||| ||||| ||||||| ||||
Sbjct: 938 agaatacctatggtcttcaacgttgtgattatgtctcctcatggttactttgcacaagac 997
Query: 649 aatgttctaggtttgcctgacactggtgggcaggttgtttatatactagatcaagtacgt 708
|||||| | || | ||||||||||| || |||||||||||||| | |||||||| |||
Sbjct: 998 aatgttttggggtaccctgacactggaggccaggttgtttatatcttggatcaagtccgt 1057
Query: 709 gcc 711
|||
Sbjct: 1058 gcc 1060