Jatropha Genome Database
- JcCA0134821.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0134821.20 + phase: 2 /partial
(787 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03317 1423 0.0
KJC_c04211 301 1e-81
KJC_c05736 165 2e-40
>KJC_c03317
Length = 1491
Score = 1423 bits (718), Expect = 0.0
Identities = 718/718 (100%)
Strand = Plus / Minus
Query: 1 gtacaaggaacttgctcaccgggttgatgaggcccttggattcatgtctgctgctggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gtacaaggaacttgctcaccgggttgatgaggcccttggattcatgtctgctgctggtct 659
Query: 61 cactgttgaccatcctattatgacaacaactgagttctggacatcccatgagtgcttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 cactgttgaccatcctattatgacaacaactgagttctggacatcccatgagtgcttgct 599
Query: 121 tctgccatatgagcaatcacttaccaggctcgattcaacttctggcctatactatgactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tctgccatatgagcaatcacttaccaggctcgattcaacttctggcctatactatgactg 539
Query: 181 ctctgcccattttctctgggttggggaacgtaccagacagctagatggtgctcatgttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctctgcccattttctctgggttggggaacgtaccagacagctagatggtgctcatgttga 479
Query: 241 gtttttgagaggagttgcaaatcctctcggcattaaggtgagtgataagatggatccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtttttgagaggagttgcaaatcctctcggcattaaggtgagtgataagatggatccaaa 419
Query: 301 tgagctagttaagctcattgagattctgaatcctcagaacaaaccaggaagaataacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tgagctagttaagctcattgagattctgaatcctcagaacaaaccaggaagaataacaat 359
Query: 361 tattacaagaatgggagctgagaatatgagagtgaagcttccccatctaattagggcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tattacaagaatgggagctgagaatatgagagtgaagcttccccatctaattagggcagt 299
Query: 421 tcgcagggctgggcaaattgtcacatgggtcagtgatcctatgcatggaaacaccattaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tcgcagggctgggcaaattgtcacatgggtcagtgatcctatgcatggaaacaccattaa 239
Query: 481 ggctccttgtggtctaaaaactcgaccatttgattccatcagggcggaggtgagagcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggctccttgtggtctaaaaactcgaccatttgattccatcagggcggaggtgagagcatt 179
Query: 541 ctttgatgtgcatgaccaagaaggaagccaccctggaggagttcatctagagatgactgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctttgatgtgcatgaccaagaaggaagccaccctggaggagttcatctagagatgactgg 119
Query: 601 ccaaaatgtgacagaatgcatcgggggatctcgaactgtgacatttgatgacttgagttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ccaaaatgtgacagaatgcatcgggggatctcgaactgtgacatttgatgacttgagttc 59
Query: 661 gcgttaccacacccactgtgaccctagactcaatgcttcacaatctctagagcttgca 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gcgttaccacacccactgtgaccctagactcaatgcttcacaatctctagagcttgca 1
>KJC_c04211
Length = 903
Score = 301 bits (152), Expect = 1e-81
Identities = 441/536 (82%), Gaps = 1/536 (0%)
Strand = Plus / Minus
Query: 218 cagctagatggtgctcatgttgagtttttgagaggagttgcaaatcctctcggcattaag 277
||||| |||||||| ||||| ||||| | |||||| || |||| ||||| || || |||
Sbjct: 829 cagctggatggtgcccatgtggagttccttagaggaatttcaaaccctcttggaatcaag 770
Query: 278 gtgagtgataagatggatccaaatgagctagttaagctcattgagattctgaatcctcag 337
||||| | || ||||||||||||||||| ||||| |||||||| ||| |||||||| |
Sbjct: 769 gtgagc-acaaaatggatccaaatgagctggttaaactcattgaaattttgaatcctaac 711
Query: 338 aacaaaccaggaagaataacaattattacaagaatgggagctgagaatatgagagtgaag 397
||||| || || || |||||||| || |||||||| |||||||| |||||||| |||
Sbjct: 710 aacaagcccggtaggataacaatcatatgcagaatgggtgctgagaacatgagagtcaag 651
Query: 398 cttccccatctaattagggcagttcgcagggctgggcaaattgtcacatgggtcagtgat 457
||||| || | || || ||||| |||||||| || | ||| || ||||||||| |||||
Sbjct: 650 cttcctcacttgatcagagcagtacgcagggcaggactaatcgtgacatgggtctgtgat 591
Query: 458 cctatgcatggaaacaccattaaggctccttgtggtctaaaaactcgaccatttgattcc 517
|| ||||| || |||||||||||||| || ||||| |||||||| || || |||||| |
Sbjct: 590 ccaatgcacgggaacaccattaaggcaccatgtggactaaaaacacgcccctttgatgca 531
Query: 518 atcagggcggaggtgagagcattctttgatgtgcatgaccaagaaggaagccaccctgga 577
|| ||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 530 attttggctgaggttagagcattctttgatgtccatgagcaagaaggaagccaccctgga 471
Query: 578 ggagttcatctagagatgactggccaaaatgtgacagaatgcatcgggggatctcgaact 637
||| |||| ||||| |||||||||||||||||||| || ||||| || || ||| | ||
Sbjct: 470 ggaattcacctagaaatgactggccaaaatgtgactgagtgcattggtgggtctaggaca 411
Query: 638 gtgacatttgatgacttgagttcgcgttaccacacccactgtgaccctagactcaatgct 697
|| || ||||| ||||| ||||| || || ||||| || ||||| || || |||||||||
Sbjct: 410 gtaacctttgacgacttaagttcacgctatcacacacattgtgatcccaggctcaatgct 351
Query: 698 tcacaatctctagagcttgcattcatcattgcagagcgccttagaaagagaaggat 753
|| |||||||| ||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 350 tctcaatctcttgagctagcatttatcattgcagagcgacttagaaaaaggaggat 295
>KJC_c05736
Length = 1023
Score = 165 bits (83), Expect = 2e-40
Identities = 362/455 (79%)
Strand = Plus / Minus
Query: 260 aatcctctcggcattaaggtgagtgataagatggatccaaatgagctagttaagctcatt 319
|||||||| ||||||||||||||||||||||||||||||| ||||| || ||| |
Sbjct: 584 aatcctcttggcattaaggtgagtgataagatggatccaacagagcttgtgaagttgtgc 525
Query: 320 gagattctgaatcctcagaacaaaccaggaagaataacaattattacaagaatgggagct 379
|| || || || ||||| |||| || |||||| | ||||||||||| |||||||||||
Sbjct: 524 gaaatccttaaccctcacaacaggcctggaagattgacaattattactagaatgggagca 465
Query: 380 gagaatatgagagtgaagcttccccatctaattagggcagttcgcagggctgggcaaatt 439
|| ||| || || | || | |||||||| ||||| || | || |||||||| ||
Sbjct: 464 gacaatctgcgaattaaacccccccatctcattagagctatccgtcaggctgggcttata 405
Query: 440 gtcacatgggtcagtgatcctatgcatggaaacaccattaaggctccttgtggtctaaaa 499
||||| ||||||||||| ||||||||||| || || ||||||||||| |||||||| ||
Sbjct: 404 gtcacctgggtcagtgaccctatgcatggcaatacaattaaggctccatgtggtctcaag 345
Query: 500 actcgaccatttgattccatcagggcggaggtgagagcattctttgatgtgcatgaccaa 559
|| || ||||||||| |||||||| ||| |||| |||||||||||||||||||| |||
Sbjct: 344 acacggccatttgataatatcagggctgagttgagggcattctttgatgtgcatgatcaa 285
Query: 560 gaaggaagccaccctggaggagttcatctagagatgactggccaaaatgtgacagaatgc 619
||||| ||| ||||||| || || ||| | ||||||||||| || || || ||||| ||
Sbjct: 284 gaaggcagctaccctggtggtgtccatttggagatgactggacagaacgtaacagagtgt 225
Query: 620 atcgggggatctcgaactgtgacatttgatgacttgagttcgcgttaccacacccactgt 679
|||| || || |||||||||| |||||||| | ||| |||| |||||| || ||
Sbjct: 224 gtcggagggtcaaaggctgtgacattcgatgacttaaattcccgtttccacacacattgc 165
Query: 680 gaccctagactcaatgcttcacaatctctagagct 714
|||||||| || ||||| || || || ||||||||
Sbjct: 164 gaccctaggctgaatgcatcccagtcgctagagct 130
Score = 83.8 bits (42), Expect = 6e-16
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 26 gatgaggcccttggattcatgtctgctgctggtctcactgttgaccatcctattatgaca 85
|||||||| || || |||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 817 gatgaggcactagggttcatggctgctgctggtctcactgttgatcatcctataatgaac 758
Query: 86 acaactgagttctggacatcccatgagtgcttgcttctgccatatgagca 135
|| |||||||| | ||||| ||||||||| | | | |||||||||||||
Sbjct: 757 acgactgagttttacacatctcatgagtgccttcatttgccatatgagca 708