Jatropha Genome Database

JcCA0134721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0134721.10 - phase: 0 
         (855 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06126                                                            484   e-136

>KJC_c06126 
          Length = 658

 Score =  484 bits (244), Expect = e-136
 Identities = 263/268 (98%), Gaps = 1/268 (0%)
 Strand = Plus / Minus

                                                                       
Query: 583 ggtaagccccacggtagggtattgagctataatcctgcaaccagaatcaccaaagttttg 642
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 658 ggtaagccctacggtagggtattgagctataatcctgcaaccagaatcaccaacgttttg 599

                                                                       
Query: 643 gtcagtgacctatattttgccaatggacttgcaatttctcccgatcaagactctttaatc 702
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtcagtgatctatattttgccaatggacttgcaatttctcccgatcaagactctttaatc 539

                                                                       
Query: 703 ttctgtgaaacttccatgaggaggtgtagaaaatattacataaaaggcaataaaaaagga 762
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 538 ttctgtgaaagttccatgaggaggtgtagaaaatattacataaaaggcaataaaaaa-ga 480

                                                                       
Query: 763 agcttggaaaaatttactgatttgcctggaatgccagacaatatccattatgatggacat 822
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agcttggaaaaatttactgatttgcctggaatgccagacaatatccattatgatggacat 420

                                       
Query: 823 ggccacttctggattgcatctgccatgg 850
           ||||||||||||||||||||||||||||
Sbjct: 419 ggccacttctggattgcatctgccatgg 392