Jatropha Genome Database
- JcCA0134361.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0134361.10 + phase: 0 /partial
(1221 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08637 1061 0.0
KJC_c02355 113 1e-24
>KJC_c08637
Length = 549
Score = 1061 bits (535), Expect = 0.0
Identities = 545/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Plus
Query: 585 aagaatagcaagaacgtggggtacaactgcaccaggattgccgtatgttgaggagtacat 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aagaatagcaagaacgtggggtacaactgcaccaggattgccgtatgttgaggagtacat 63
Query: 645 cacaccagctggtaattggctcataggtggagatttggaagtattaaagcctatcaaata 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cacaccagctggtaattggctcataggtggagatttggaagtattaaagcctatcaaata 123
Query: 705 taatgatgggcttgatcattataggctctctcccaaacaacttcggcaggaatttgatag 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 taatgatgggcttgatcattataggctctctcccaaacaacttcggcaggaatttgatag 183
Query: 765 gcgtcaagctgatgcagtttttgcttttcaattgaggaaccctgtacataatgggcatgc 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcgtcaagctgatgcagtttttgcttttcaattgaggaaccctgtacataatgggcatgc 243
Query: 825 cttattgatgaatgatacacgaaggagacttttggaaatgggttacaagaatccaatttt 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cttattgatgaatgatacacgaaggagacttttggaaatgggttacaagaatccaatttt 303
Query: 885 acttcttcatcctttgggaggtttcacaaaggctgatgatgtgcctttggatgttcggat 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acttcttcatcctttgggaggtttcacaaaggctgatgatgtgcctttggatgttcggat 363
Query: 945 ggaacagcatagcaaggtgctcgaagatggtgttcttgaccctaatactaccattgtcgc 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggaacagcatagcaaggtgctcgaagatggtgttcttgaccctaatactaccattgtcgc 423
Query: 1005 tatattcccttcacctatgcattatgctggtccaactgaagtacagtggcatgccaaggg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tatattcccttcacctatgcattatgctggtccaactgaagtacagtggcatgccaaggg 483
Query: 1065 acggataaatgcaggtgctaatttttatattgtaggtcgtgatcctgctggtatgggtca 1124
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 484 acggataaatgcaggtg-tactttttatattgtaggtcgtgatcctgctggtatgggtca 542
Query: 1125 cccaaca 1131
|||||||
Sbjct: 543 cccaaca 549
>KJC_c02355
Length = 1592
Score = 113 bits (57), Expect = 1e-24
Identities = 189/233 (81%)
Strand = Plus / Minus
Query: 958 aaggtgctcgaagatggtgttcttgaccctaatactaccattgtcgctatattcccttca 1017
||||| || ||||||||||| ||||| ||| | || || | ||| ||||||| || ||
Sbjct: 647 aaggttcttgaagatggtgtgcttgatcctgagacaactgtggtctctatatttccatct 588
Query: 1018 cctatgcattatgctggtccaactgaagtacagtggcatgccaagggacggataaatgca 1077
|| ||||| ||||||||||||||||| || ||||||||||| || | ||||| ||||||
Sbjct: 587 cccatgcactatgctggtccaactgaggtgcagtggcatgcaaaagctcggatcaatgca 528
Query: 1078 ggtgctaatttttatattgtaggtcgtgatcctgctggtatgggtcacccaacagagaag 1137
|| ||||| ||||| ||||| ||| | ||||| ||||| ||| |||| ||| |||||
Sbjct: 527 ggagctaacttttacattgttggtagggatccagctggaatgagtcatccagttgagaaa 468
Query: 1138 agagatttatatgatcctgatcatggaaagaaggttctgagcatggctcctgg 1190
||||||||||||||| | || ||||| || ||||| ||||| |||||||||||
Sbjct: 467 agagatttatatgatgcggaccatgggaaaaaggtgctgagtatggctcctgg 415