Jatropha Genome Database

JcCA0134311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0134311.10 + phase: 2 /partial
         (247 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01479                                                            490   e-139

>KJC_c01479 
          Length = 1409

 Score =  490 bits (247), Expect = e-139
 Identities = 247/247 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgcagagggttgtcagcagaaagaacattccactcagccatgcagggcttgcactctttg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792  tgcagagggttgtcagcagaaagaacattccactcagccatgcagggcttgcactctttg 851

                                                                        
Query: 61   tatagctagatgtgttcagtgtgggcggtgtattaatgacagtgaatatgaggagacatt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852  tatagctagatgtgttcagtgtgggcggtgtattaatgacagtgaatatgaggagacatt 911

                                                                        
Query: 121  ctgccttgagttgctttgttcagattgttggaagcaagtcaattgccaggaggaggagga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912  ctgccttgagttgctttgttcagattgttggaagcaagtcaattgccaggaggaggagga 971

                                                                        
Query: 181  tggtaagattagtccacccaaggctcctgctgtgtgtgaatctagctgcagttttcgtct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  tggtaagattagtccacccaaggctcctgctgtgtgtgaatctagctgcagttttcgtct 1031

                   
Query: 241  ttatgga 247
            |||||||
Sbjct: 1032 ttatgga 1038