Jatropha Genome Database
- JcCA0134061.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0134061.10 + phase: 0 /partial
(929 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02434 396 e-110
>KJC_c02434
Length = 1108
Score = 396 bits (200), Expect = e-110
Identities = 594/712 (83%), Gaps = 10/712 (1%)
Strand = Plus / Minus
Query: 187 ttggccaaaaaat-acggaccggtaatgagtattaaacttggccagcatccttatcttgt 245
||||||||||| | ||||||| |||||| || || ||||||| || ||||| |||||
Sbjct: 1080 ttggccaaaaacttacggacctgtaatgggtgttcaacttgggcaagttcctttccttgt 1021
Query: 246 tgtttcttcgccggaaacagccaaagaagtaatgagaacccaagatcccattttcgctga 305
|| || |||||||||||||| ||||||||||||| || ||||||||| |||| || ||
Sbjct: 1020 cgtgtcctcgccggaaacagctaaagaagtaatgaaaatacaagatcccgtttttgcaga 961
Query: 306 tcgaccgcttgtccttgctggagaattagtgctttacaaccgaaatgacataggttttgg 365
||||||||||||||||| |||||| |||||||||| |||||||||||||| | ||||||
Sbjct: 960 acgaccgcttgtccttgcaggagaaatagtgctttataaccgaaatgacatcgtttttgg 901
Query: 366 gctgtacggagatcaatggagacaaatgagaaaattttgcgcattggaattacttagcac 425
| |||||||||||| ||||| |||||||||||||||||| | |||||||||||||||||
Sbjct: 900 gtcgtacggagatcagtggaggcaaatgagaaaattttgcacgttggaattacttagcac 841
Query: 426 aaaacgaatacagtcgtttcgatccgtaagggaagaagaaattgcagtgtttgtaaaatc 485
||||||| |||||||||| ||| |||| || ||||||||| ||||| ||||||||| |
Sbjct: 840 aaaacgagtacagtcgttccgacccgtgagagaagaagaagttgcatcttttgtaaaaac 781
Query: 486 -tctgcgatcaaaagaaggaagttctgttaatctgagtcatactttatttgctttaacaa 544
| |||| |||| |||||| | |||||||||| | |||| ||||| ||||||||||||
Sbjct: 780 ttatgcgtacaaagaaaggaactcctgttaatcttactcatgcttta-ttgctttaacaa 722
Query: 545 actctataattgcaagaaatactgtcggccataaaagcaaaaatcaagaagcgtt-gctg 603
| |||||| ||||||||||| |||| || |||||||||||||| |||| |||||| | |
Sbjct: 721 attctatagttgcaagaaatgctgttggtcataaaagcaaaaaccaag-agcgttagtta 663
Query: 604 aaaattattgatgatatagttgagtcactaggaggtctcagcacagttgatatctttcct 663
|| |||||||||| ||||||| ||| | ||||| | || | |||||||||||||||
Sbjct: 662 gaagttattgatgacatagttgtatcagga-gaggtgttagtatagttgatatctttcc- 605
Query: 664 tccttaaaatggctaccttcagtcaaaagggaaaggtcaagaatttggaaattgcattgt 723
||| || ||||||| ||| | | ||| |||||||| ||||||||||||||||||||
Sbjct: 604 tccctacaatggcttcctactgccaagagggaaagatcaagaatttggaaattgcaccaa 545
Query: 724 gaaacagatgagattcttgaaggtatcttagaagagcataaagcgaacaggcaggcggca 783
| |||||||||||||| |||| ||||||| ||||||||| ||| || || |||||| ||
Sbjct: 544 aatacagatgagattctcgaagatatcttacaagagcatagagctaa-agacaggcgaca 486
Query: 784 gctttcaagaacgacgatgggagccaagctgataatcttcttgatgttcttttggatctt 843
|||| |||||| ||| ||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 485 gcttccaagaattgggataggagcgaagctgataatcttcttgatg-tcttttggatctt 427
Query: 844 caacaaaatggaaatcttcaagttcctttaactgacgtcaacatcaaagcag 895
||||| | ||||||||| | | |||||||||||| ||| |||||||||||
Sbjct: 426 caacagagcggaaatcttgatg-tcctttaactgatgtcgccatcaaagcag 376