Jatropha Genome Database
- JcCA0132071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0132071.10 + phase: 0
(1140 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07709 127 6e-29
>KJC_c07709
Length = 872
Score = 127 bits (64), Expect = 6e-29
Identities = 517/665 (77%), Gaps = 4/665 (0%)
Strand = Plus / Plus
Query: 116 ttgaaactgttcgcttcttccattgctacaaacgaggagttgatcgtgtttttgtggatc 175
|||||||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||
Sbjct: 141 ttgaaactgtccgcttcttccactgctacaagcgaggagttgatcgtgtgttcgtggatc 200
Query: 176 acccaatgtttctagagaaggtatggggaaaaactggttcgaaactctatggtcctcag- 234
||||||| || || |||||||| ||||| |||||||| || ||| ||||||| || |||
Sbjct: 201 acccaattttccttgagaaggtttggggcaaaactgggtccaaaatctatgg-ccccaga 259
Query: 235 gcaggaacagattatgaaaataaccaacttcgtttcagtttgttttgccaggcagctatt 294
||||||| ||||| | | |||||| | || || || ||||| |||| || ||| ||
Sbjct: 260 gcaggaatcgattacaaggacaaccaaatgcgatttagcttgttgtgcctagctgctctt 319
Query: 295 gaagcaccgcg-gttgttaagtctcaacagtggtaaatacttctcaggaccctatggtga 353
|| ||||| | || | || | | ||||| ||||| ||||||||||| ||||| ||
Sbjct: 320 gaggcaccaagaattctgaact-tgaacagcaacaaatatttctcaggaccatatggaga 378
Query: 354 ggatgttgtcttcatcgcaaatgattggcacactgctcttcttccctgctacctaaaagc 413
||||||| ||||||| || |||||||||||| ||||| ||||||| || ||||||||| |
Sbjct: 379 ggatgttatcttcattgccaatgattggcacgctgctattcttccatgttacctaaaatc 438
Query: 414 cttttacaaatcaaaggggatgtatagaaatgccaaggtggttttctgcatccacaatat 473
| |||||||| | | ||| || || | ||||||||| | || ||||||||||| ||
Sbjct: 439 catttacaaacctatgggaatttaccagagtgccaaggttgccttttgcatccacaacat 498
Query: 474 tgcataccaaggacgatttgccttttcggattttgcacttcttaatcttccagaacggtt 533
|||||| || || |||||||||| || || || ||||||| || | ||||| | |
Sbjct: 499 tgcatatcagggcagatttgccttctcagacttctcacttctcaacttgccagatcaata 558
Query: 534 taagaactcattcgannnnnnngatggatatgaaaaacctgtgaaaggaaggaagattaa 593
|||| ||| || || ||||||||| | || ||||| || |||||||| || ||
Sbjct: 559 taagggctcctttgactttatcgatggatataataagcctgtcaagggaaggaaaatcaa 618
Query: 594 ttggatgaaagccggaatattagaatcagacaggattgtaacagttagtccacattatgc 653
||||||||| || ||||| || |||||||||||| || | || || || ||| | |||||
Sbjct: 619 ttggatgaaggctggaatcttggaatcagacagggttttgactgtgagcccatactatgc 678
Query: 654 agaggaactagtttctggtatagagaaaggtgttgaattagataacatccttcgtatgac 713
||||||| |||||||| ||| | |||||| || | ||||| ||| |||| | ||
Sbjct: 679 ccaggaacttgtttctggagaagatagaggtgtggagctggataatatcattcgcaaaac 738
Query: 714 cggtatttctggaattgtgaacggtatggatgttcaggagtggaatccatccactgacaa 773
|| ||| |||| ||||| || ||||||||||| |||||||||||||| | ||||||||
Sbjct: 739 tggcattactggtattgtaaatggtatggatgtccaggagtggaatcctgctactgacaa 798
Query: 774 atata 778
|||||
Sbjct: 799 atata 803