Jatropha Genome Database
- JcCA0131871.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0131871.10 + phase: 1 /partial
(1298 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04189 894 0.0
KJC_c06534 170 5e-42
>KJC_c04189
Length = 474
Score = 894 bits (451), Expect = 0.0
Identities = 472/475 (99%), Gaps = 3/475 (0%)
Strand = Plus / Minus
Query: 542 attaaagggaataatagaaagtagattaaaaacagcacaatcaagtttagacggttgtta 601
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 472 attaaagggaataatagaaagtagattaaaa-cagcacaatcaagtttagacggttgtta 414
Query: 602 tggagatgatttgctgggtataatgatagaatcattagtaagtaaaacagctgaaagcaa 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tggagatgatttgctgggtataatgatagaatcattagtaagtaaaacagctgaaagcaa 354
Query: 662 aaatagtccaaaattaagcatgtgtgaaataatggaagactgtaaaacattcttcttcgc 721
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aa-tagtccaaaattaagcatgtgtgaaataatggaagactgtaaaacattcttcttcgc 295
Query: 722 cgggcaagaaacaaccgcaaatttactaacttggacaactttcttgttgagcttacatac 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cgggcaagaaacaaccgcaaatttactaacttggacaactttcttgttgagcttacatac 235
Query: 782 agactggcaagaaaaacttagagaagaggtgctgaaagaatgtggaatggaaattcctga 841
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 agactggcaa-aaaaacttagagaagaggtgctgaaagaatgtggaatggaaattcctga 176
Query: 842 tgcagacatgttggccaaattaaaattagttaatatggttttgctcgaggctctaaggct 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tgcagacatgttggccaaattaaaattagttaatatggttttgctcgaggctctaaggct 116
Query: 902 ttacggtcctgtaataatgttaatcaggaaaacgtcagaagatatgaaactgggagattt 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ttacggtcctgtaataatgttaatcaggaaaacgtcagaagatatgaaactgggagattt 56
Query: 962 gatgattccaaaagatacatcccttacaattcccctggtaaaaattcataggagc 1016
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 gatgattccaaaagatacatcccttacaattcccctggtaaaaattcataggagc 1
>KJC_c06534
Length = 1439
Score = 170 bits (86), Expect = 5e-42
Identities = 197/234 (84%)
Strand = Plus / Minus
Query: 1004 aattcataggagcaaagaatactggggagaggacgcaaatgagtttaatccattgagatt 1063
|||||| |||| |||| ||||||||||||| || ||| |||| ||||||||||| |||||
Sbjct: 360 aattcacaggaacaaaaaatactggggagacgatgcagatgaatttaatccattcagatt 301
Query: 1064 tgctaatggggtgtcaaaggctgcgaaacacccaaatgctttgttagcgtttgcaatagg 1123
||| || ||||| ||||| ||||||||||||||||||||||| | | |||| ||| ||
Sbjct: 300 tgcaaacggggtctcaaaagctgcgaaacacccaaatgctttccttggctttggaatggg 241
Query: 1124 gccaagaatttgtattgggcagaattttgcaatgttagaagcaaagactgtgcttgcttt 1183
|| ||| |||| ||||| ||||||||||| ||| | ||||| ||||| |||||| ||||
Sbjct: 240 tcccagagtttgcattggccagaattttgcgatgcttgaagctaagacagtgcttacttt 181
Query: 1184 gattcttcagaggttttcgctttcgctttcgcctgaatataaacatgctcctgt 1237
||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||
Sbjct: 180 gattcttcaaaggttgtccctttccctttcccctgaatataaacacactcctgt 127