Jatropha Genome Database
- JcCA0130751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0130751.10 - phase: 0 /partial
(919 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04586 1764 0.0
>KJC_c04586
Length = 1082
Score = 1764 bits (890), Expect = 0.0
Identities = 900/902 (99%), Gaps = 1/902 (0%)
Strand = Plus / Plus
Query: 18 ggagaaaactcttttaggtctcttcgccgccgtcatcgtcgccattgtcgtttctaaatt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagaaaactcttttaggtctcttcgccgccgtcatcgtcgccattgtcgtttctaaatt 60
Query: 78 acgcggcaagcgctttaagcttcctccgggtcctttacccatacccgtctttggtaattg 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgcggcaagcgctttaagcttcctccgggtcctttacccatacccgtctttggtaattg 120
Query: 138 gcttcaagtcggcgatgacttaaaccatcgtaatctcaccgatctcgctaaaaaattcgg 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcttcaagtcggcgatgacttaaaccatcgtaatctcaccgatctcgctaaaaaattcgg 180
Query: 198 cgacatatttttgctccgtatgggacaacggaatcttgtcgttgtctcttcgccggactt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgacatatttttgctccgtatgggacaacggaatcttgtcgttgtctcttcgccggactt 240
Query: 258 agctaaagaggttttacatactcaaggtgttgaatttggatcccgaactcgaaatgtcgt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agctaaagaggttttacatactcaaggtgttgaatttggatcccgaactcgaaatgtcgt 300
Query: 318 ttttgatatctttaccggtaaaggacaggatatggtgtttaccgtttacggtgaacactg 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttttgatatctttaccggtaaaggacaggatatggtgtttaccgtttacggtgaacactg 360
Query: 378 gaggaagatgaggaggatcatgacggttccgttttttactaataaggtggttcaacagta 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggaagatgaggaggatcatgacggttccgttttttactaataaggtggttcaacagta 420
Query: 438 tagatatggatgggaagatgaggcggggaaggtggtggaggatgttaagaagaatccaca 497
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 tagatatggatgggaagatgagggggggaaggtggtggaggatgttaagaagaatccaca 480
Query: 498 agctgccactaccggtattgtgttaagacggcgattgcagttgatgatgtacaataatat 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctgccactaccggtattgtgttaagacggcgattgcagttgatgatgtacaataatat 540
Query: 558 gtatagaatcatgtttgacaggagatttgaaagtgaagacgatcctttgtttgttaagct 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtatagaatcatgtttgacaggagatttgaaagtgaagacgatcctttgtttgttaagct 600
Query: 618 taaggctttgaatggagagagaagtagattggctcaaagctttgagtataactatggtga 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taaggctttgaatggagagagaagtagattggctcaaagctttgagtataactatggtga 660
Query: 678 ttttattcctattttgagaccctttttgagaggttacttgaagatctgtaaagaagtgaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttttattcctattttgagaccctttttgagaggttacttgaagatctgtaaagaagtgaa 720
Query: 738 ggagagaaggttgcagctcttcaaggacttcttcgtcgaggaaaggaagaagctttcaag 797
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 721 ggagagaaggttgcagctcttcaaggacttcttcgtcgaggaaaggaagaagc-ttcaag 779
Query: 798 caccaagagcatgaacaatgaagggttgaaatgcgcaatagatcatattttggacgcaca 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 caccaagagcatgaacaatgaagggttgaaatgcgcaatagatcatattttggacgcaca 839
Query: 858 gcagaagggagagatcaatgaagacaacgttctttacattgtagagaatatcaacgttgc 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gcagaagggagagatcaatgaagacaacgttctttacattgtagagaatatcaacgttgc 899
Query: 918 tg 919
||
Sbjct: 900 tg 901