Jatropha Genome Database
- JcCA0128181.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0128181.20 + phase: 0 /partial
(1408 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12848 846 0.0
KJC_c08832 698 0.0
>KJC_c12848
Length = 438
Score = 846 bits (427), Expect = 0.0
Identities = 436/438 (99%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 515 tttttacctctggttatgacacggttgtgcgaatgtgggacatggaagatggattatcca 574
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 438 tttttacctctggttatgacacggttgtgcgaatntgggacatggaagatggattatcca 379
Query: 575 tcgcatcatcaaggcctcttggatgcactattcgagcagttgctgcagatacaaagctct 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcgcatcatcaaggcctcttggatgcactattcgagcagttgctgcagatacaaagctct 319
Query: 635 tggttgctggtggtactgatggtttcatccaaggttggagagtggtggagggtctcccat 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tggttgctggtggtactgatggtttcatccaaggttggagagtggtggagggtctcccat 259
Query: 695 gtttgttcaatctcaagggttctgaggagccaaatattgaatttagaatttgggaacatg 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtttgttcaatctcaagggttctgaggagccaaatattgaatttagaatttgggaacatg 199
Query: 755 aggggcctataa-cttctcttgccttggaccttatgaggatttacagtggttcttgggac 813
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aggggcctataaccttctcttgccttggaccttatgaggatttacagtggttcttgggac 139
Query: 814 atgactgttcgtgtatgggatcgttcctcattgaaatgcttaaaggtcttgaggcataat 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgactgttcgtgtatgggatcgttcctcattgaaatgcttaaaggtcttgaggcataat 79
Query: 874 gattgggtatggagccttactccacatgatacaacagttgctaccacttcaggatcagat 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 gattgggtatggagccttactccacatgatacaacagttgctaccacttcaggatcagat 19
Query: 934 gtgtatgtttgggatact 951
||||||||||||||||||
Sbjct: 18 gtgtatgtttgggatact 1
>KJC_c08832
Length = 372
Score = 698 bits (352), Expect = 0.0
Identities = 371/375 (98%), Gaps = 3/375 (0%)
Strand = Plus / Minus
Query: 1013 cgcgaagccacacgggtgacttcctttttactggaggagaagatggggctatacatatgt 1072
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 372 cgcgaagccacacgggtgactcc--ttttactggaggagaagatggggctatacatatgt 315
Query: 1073 ttgagatcatacgtcacagtcacacagcttatgattttaaggttgcaacttgggttcctc 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgagatcatacgtcacagtcacacagcttatgattttaaggttgcaacttgggttcctc 255
Query: 1133 actctggtgctgtacattcagttgcatttgagtttccttggcttgtttcagcttctagtg 1192
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 254 actctggtgctgtacattcagttgcatttgagtt-ccttggcttgtttcagcttctagtg 196
Query: 1193 atgggaagctgtcactaatagatgttagaaaactactaaggactagcaggcgatctttag 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgggaagctgtcactaatagatgttagaaaactactaaggactagcaggcgatctttag 136
Query: 1253 gaaagagtgtttcaagggtgaaaaatgtggattgtagcagtgtggagccaccccaaagaa 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gaaagagtgtttcaagggtgaaaaatgtggattgtagcagtgtggagccaccccaaagaa 76
Query: 1313 tgctacatggatttgggccgaatttattttcagtggacattggggctgaccgtattgtat 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tgctacatggatttgggccgaatttattttcagtggacattggggctgaccgtattgtat 16
Query: 1373 gtggaggagaggaag 1387
|||||||||||||||
Sbjct: 15 gtggaggagaggaag 1