Jatropha Genome Database

JcCA0127751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0127751.10 - phase: 0 /partial
         (498 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03850                                                            987   0.0  

>KJC_c03850 
          Length = 818

 Score =  987 bits (498), Expect = 0.0
 Identities = 498/498 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attggtataactggactcccattaggaatttttacttatgtgctcgatcgggtgcctcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 attggtataactggactcccattaggaatttttacttatgtgctcgatcgggtgcctcct 218

                                                                       
Query: 61  ggcacagttgatgtgattctatcatattgtcactacagtattaatgattcaacgctgttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ggcacagttgatgtgattctatcatattgtcactacagtattaatgattcaacgctgttg 278

                                                                       
Query: 121 gatatattgccttacttgaagagcaaaggggttgggataattagcgcttctccacttgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gatatattgccttacttgaagagcaaaggggttgggataattagcgcttctccacttgca 338

                                                                       
Query: 181 atggggcttcttacagagaatggccctccagagtggcacccagcttctcctgaactaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atggggcttcttacagagaatggccctccagagtggcacccagcttctcctgaactaaag 398

                                                                       
Query: 241 tctgcatgccaagctgctgctgcctattgtaaagagaaggggaagaatatttcaaagtta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tctgcatgccaagctgctgctgcctattgtaaagagaaggggaagaatatttcaaagtta 458

                                                                       
Query: 301 gccatgcaatatagtttgtcaaacaaggatatatctacagtgctagttggcatgaactct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gccatgcaatatagtttgtcaaacaaggatatatctacagtgctagttggcatgaactct 518

                                                                       
Query: 361 gttagacaggttgaggagaatgttactgctgccatcgaactcgcaacatttgggaaggat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gttagacaggttgaggagaatgttactgctgccatcgaactcgcaacatttgggaaggat 578

                                                                       
Query: 421 caacaaactctggctgagattgaagcaattgttagccctgtgaagaatcagacttggccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 caacaaactctggctgagattgaagcaattgttagccctgtgaagaatcagacttggccc 638

                             
Query: 481 agcggaatccaacatagc 498
           ||||||||||||||||||
Sbjct: 639 agcggaatccaacatagc 656